Gene PMT9312_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0390 
Symbol 
ID3765187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand+ 
Start bp370732 
End bp371367 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content31% 
IMG OID637796908 
Producthypothetical protein 
Protein accessionYP_396887 
Protein GI78778775 
COG category[R] General function prediction only 
COG ID[COG0325] Predicted enzyme with a TIM-barrel fold 
TIGRFAM ID[TIGR00044] pyridoxal phosphate enzyme, YggS family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.250945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCCTT CAAATTATTT AAAAATAAAA AATAAAATCC CATCAAATGT AAATATCCTT 
GCAGTAAGTA AAGGATTTAA AAGTCAAGAA ATCAAGACTA TTCAAAATAT AGGTCAGAAT 
GATTTTGGTG AGAGTAAGTT TCAGGAGGCT TTTGAGAAGC AATTAATTCT AAAAGACCTT 
AAAAAAATAA AATGGCACTT TATTGGACGA ATACAAAGTA ATAAAATAAG AAAGATAGTG 
CAAAATTTTA AATACATTCA TTCTGTAGAT TCATTTGAGA AGTTGCAAAA GATTTCTAAT 
ATTTCAGATG CAGAGAAGAA AAATCCATTG ATTATGTTGC AGGTTAAGTT GAGTGATGAC 
CCTACAAAAG GAGGCTTTAA TCCTGACCTT TTAGTATTGA AATGGAGAGA AATTCAAGAA 
TTGAAAAATA TCACATTAAC CGGTTTGATG ACTATTAATC CTAAAGGACT TAGCTCCAAA 
GAAAATACAA AGTTGTTTAA AAAATGTCGT TCCTTAGCGG ATTCACTTCA ACTTCCAGAT 
TGTTCAATGG GAATGTCAGG AGATTGGGAA GAAGCTATTG ACGCTGGATC AACTTGGGTA 
AGGTTAGGAT CATTAATTTT TGGAGATAGA TCTTAA
 
Protein sequence
MNPSNYLKIK NKIPSNVNIL AVSKGFKSQE IKTIQNIGQN DFGESKFQEA FEKQLILKDL 
KKIKWHFIGR IQSNKIRKIV QNFKYIHSVD SFEKLQKISN ISDAEKKNPL IMLQVKLSDD 
PTKGGFNPDL LVLKWREIQE LKNITLTGLM TINPKGLSSK ENTKLFKKCR SLADSLQLPD 
CSMGMSGDWE EAIDAGSTWV RLGSLIFGDR S