Gene PMT9312_0318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0318 
Symbol 
ID3765107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand- 
Start bp303668 
End bp304768 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content37% 
IMG OID637796828 
Product30S ribosomal protein S1 
Protein accessionYP_396815 
Protein GI78778703 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.721162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACAAA TGAACGAAAA TTCTTCTCAA ACCACTAAAG AGCTTTCTGA AAATAAAGAA 
TTTAAAAATT CACCTGAATT AGATAATAAT TCAATGCCCA AAAATGAAGA AGATTTATCA 
TTCGAAAAGA GCGATATCCC ATCAGCAGAT GCTTCCTCTA GCAGAACTAA TACCGATTTA 
GATAATGCAG GATTCACACA AGAGGAATTT GCATCACTGT TGGGTAAATA TGACTATAAC 
TTTAAACTTG GTGATCTTGT AAAAGGAACC GTTTTTGCTT TAGAGCCTAA AGGGGCAATG 
ATAGACATAG GTGCAAAAAC AGCTGCTTTT ATGCCTGTTC AGGAGGTTTC AATAAATAGA 
GTTGAAGGAC TAGATGATGT TTTACAACCT TCAGAAAGCA GAGAATTTTT CATAATGAGT 
GAAGAAAATG AAGATGGCCA GTTAGCACTT TCTATTAGAA GAATTGAATA TCAAAGGGCA 
TGGGAAAGGG TTAGACAATT GCAAAAAGAA GATGCAACTA TTTATTCTGA AGTTTTCGCA 
ACGAACAGAG GTGGAGCTCT TGTAAGAGTG GAAGGGTTAA GAGGTTTTAT CCCAGGATCT 
CATATAAGTG CCCGAAGGGT AAAAGATGAC TTAGAAGGTG AGTACCTACC ATTAAAATTT 
CTTGAAGTTG ATGAAGAGAG AAACAGATTA GTATTGAGTC ATAGAAGAGC CTTAGTCGAG 
AAAAAAATGA ATAGGCTTGA GGTGGGTGAA GTTGTTGTAG GTTCTGTTAA AGGGATTAAA 
CCCTATGGAG CTTTTATTGA CATTGGAGGA GTTAGTGGTC TATTGCACAT TTCTGAAATT 
AGTCATGAAC ATATAGAAAC GCCTCATAAT GTTTTAAATG TTAGTGATCA AATGAAGGTA 
ATGATAATTG ACCTAGATTC GGAAAGAGGA AGGATTTCAT TATCTACAAA AGCTCTTGAA 
CCTGAACCAG GAGATATGCT GACTGACCCT CAAAAAGTTT TTAGTAAGGC TGAAGAGATG 
GCTGCAAAAT ACAAACAAAT GTTGTTCGAG CAAACCGACG AAGCTGAAGA AACCGCTTCA 
GCTTCGTCGG AAACTGTCTA G
 
Protein sequence
MQQMNENSSQ TTKELSENKE FKNSPELDNN SMPKNEEDLS FEKSDIPSAD ASSSRTNTDL 
DNAGFTQEEF ASLLGKYDYN FKLGDLVKGT VFALEPKGAM IDIGAKTAAF MPVQEVSINR 
VEGLDDVLQP SESREFFIMS EENEDGQLAL SIRRIEYQRA WERVRQLQKE DATIYSEVFA 
TNRGGALVRV EGLRGFIPGS HISARRVKDD LEGEYLPLKF LEVDEERNRL VLSHRRALVE 
KKMNRLEVGE VVVGSVKGIK PYGAFIDIGG VSGLLHISEI SHEHIETPHN VLNVSDQMKV 
MIIDLDSERG RISLSTKALE PEPGDMLTDP QKVFSKAEEM AAKYKQMLFE QTDEAEETAS 
ASSETV