Gene PMT9312_0305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0305 
Symbol 
ID3765093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp290113 
End bp291360 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content28% 
IMG OID637796814 
ProducttRNA nucleotidyltransferase/poly(A) polymerase 
Protein accessionYP_396802 
Protein GI78778690 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.535708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGATA TCTCTGATTA CATCCAAGGA GAATTAATAA AAACTCCATT TAATCTATAT 
AACCTAATTG CTAAATACAT AGAATCTAAT AACAATACTA AAGTAGCTTT TGTTGGCGGT
TATTTAAGAG ATTTATTAAT TAGTAAATTC CACAAAAAAT CGTTTTCTAA ACCTGTAGAT
ATTGATCTTG TAATTGAAGG ATCCTCTATT TCTCTTGCAA AATTTATAAA AAAAAATATT
GTAAATGTCG ATTTATGTCT CATCAAGGAA TTTAATTTAT ACAACACTGT AGAAATAAAT
ATTAATGACT ATAAAATTGA TATTGCTTCT GCAAGAAAAG AAATTTATTC TGCTCCAGGC
TTAAATCCCA CGGTAAATAA AAGTACTATT GAGGAGGATC TTAAGAGGAG AGATTTCACT
ATAAATTCAA TAGCCTTCGA GGTCTCGACA AGGAAAATCT ATGATCTTTA TGGAGGAATT
TCTGATATAA AAAGTAAAAA GTTGAACTTA CTTCACAGTA ATAGTATTTC AGATGATCCA
AGTAGATTAA TTAGATGTGC AAAATATGCT TCAAGGTTAG ATTTCAATAT TTCAAATAGT
TCCCTCAAAC AATCTCAAGA AACAGTTAGA AAATGGCCAT GGAAAATTTC AGAAACTCAC
CAGAAAATGA TTTACCCTGC TGCACTAGGA ATACGAATAA GGATGGAACT AGCTGAAATA
TGCAAACACG ATAATTTGAC TAATGTGATT TCGATAATTC ATAAATGGGA AATTATCTCA
ATCTTAAATG AAAATATTAA GGTCGATAAA AGGTTTTTAA GAGGACTAAA TTGGATTAAG
AGGTTAAAGG GAAATCATAT GCTTTACTTA TTAAAAGATT CAGAAGATTT AGAAAAAGCA
TGTAAAAGAT TTTTGGTAAA TAATAGTGAG ATAAAAATAT TAGAAGATTA TTTTAATATC
AAAAAGATAT TAAATACAAA CCAAAAAAAT TTCAATCATT TTTCTCCATC AAGTTGGACA
GAATTTATTG AGGACAGAAA CCTTAATGAT GAGACAGTCA AATTATTAAT TTGTGATGGA
GGACCATACT GGCGTAAATT GTTTAAGTGG TTATTTATTT ACAAATTCAT AAAATCAAAA
AAAGATGGAG AAACATTAAA AAAAGAAGGA TGGGATCCAG GGAAGGAGAT GGGAAAGGAA
ATCAAAAGAT TAAGATATTT AGAAATTGAC AAATTCAATA GAAATTAA
 
Protein sequence
MNDISDYIQG ELIKTPFNLY NLIAKYIESN NNTKVAFVGG YLRDLLISKF HKKSFSKPVD 
IDLVIEGSSI SLAKFIKKNI VNVDLCLIKE FNLYNTVEIN INDYKIDIAS ARKEIYSAPG
LNPTVNKSTI EEDLKRRDFT INSIAFEVST RKIYDLYGGI SDIKSKKLNL LHSNSISDDP
SRLIRCAKYA SRLDFNISNS SLKQSQETVR KWPWKISETH QKMIYPAALG IRIRMELAEI
CKHDNLTNVI SIIHKWEIIS ILNENIKVDK RFLRGLNWIK RLKGNHMLYL LKDSEDLEKA
CKRFLVNNSE IKILEDYFNI KKILNTNQKN FNHFSPSSWT EFIEDRNLND ETVKLLICDG
GPYWRKLFKW LFIYKFIKSK KDGETLKKEG WDPGKEMGKE IKRLRYLEID KFNRN