Gene PMT9312_0282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0282 
Symbol 
ID3765070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp270054 
End bp271538 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content33% 
IMG OID637796791 
Productretinal pigment epithelial membrane protein 
Protein accessionYP_396779 
Protein GI78778667 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0182948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTAATT TACAAGATAA AAAAATTGAT AAATTTAAAA GTTTTAATAA AGAAGATTGG 
TCAAGTGCGT ATCAAAATGT AGAAAAGGAG CTAACCAAGG AGCCTCTAAA AATTAGCAAA
GGTAATAATA TAAAAAATTT AAATGGAACA TTATTAAGAA ATGGACCAGG AATATTAGAG
AGAGGTGGAC AATGGGTTCA TCATCCATTT GATGGTGATG GAATGATAAC TTCCATAAAA
TTCGAAAATG GTCAGCCATT TTTAACAAAT AGATTTGTTA AAACTAAAGG CTATTTGGAA
GAAGAAAAAA TAAATAAATT TATTTATAGA GGTGTATTTG GGACACAAAA AAATGGAGGA
ATTCTAAATA ATGCATTAGA TCTAAAATTC AAGAATATCG CTAATACTCA TGTTGTTAAA
TTAGGAGATG AAATTCTCGC ATTATGGGAA GCAGCCGGTC CACATGCAAT GGATCCTGAT
AGTCTTAACA CTATTGGTTT AACAACATTA AAAGGGGTAC TCAAGCCTAA CGAAGCATTT
AGTGCCCATC CCAAAACAGA CCTAAATTCA AATGCATCTT CAGAACTTTT AGTCACTTTT
GGAGTACAAA CCGGGCCAAA AAGTACCATT AGATTAATGG AATTTAATAA TGCTGGTACA
AATTCTGGAG AGCTCATTTT CGACAGAAAA GATACCCTTA ATGGCTTTGC ATTCCTTCAT
GATTTCGCAA TTACAACTAA TTGGGCAATA TTTTTACAGA ATGCTATTGA TTTCAATCCT
CTTCCATTTG TAATGGGCCA AAGAGGAGCA GCTCAATGTC TAAAGTCAAA CCCAAATAAA
AAGGCAAAGT TTTTTATCAT CCCCAGAGAA AGTGGATTAT TTAGAGGTCA GCCACCGCTA
ACAATAGATG CTCCAGAAGG ATTCGTTTTT CATCATGTAA ATGCATTTGA AAAAGATTCC
AAAATCATAT TAGATAGTAT TTTTTATGAT GATTTTCCAT CAGTTGGTCC AGACGAGAAT
TTTAGGGATA TTGACTTTGA TAAATATCCA GAAGGAAAAC TGAAAAGATC AATTATCGAT
CTAAAGAAAA AAACTAGTGA ACTTGAAACT TTAAGTGAAC AATGTTGTGA ATTTGCTGTT
GTTAATCCTA AAAACTTAGG ATTAACAGCA ACTTTTAGTT GGATGGCAAG CACATCTCAA
AAGATGGGGA ACGCTCCACT GCAAGCAATA AAAAAAATAA ATTTAACATC TAAGGAAGAG
ATTTCTTGGT CAGCTGGTCC AAGTGGATTC GTAAGTGAAC CAATCATGGT TCCATCAGAA
AACTCCTCTA AGGAAGATGA GGGATTTTTG TTTATACTTT TATGGAACGG AGAAAGAAGA
GGAAGCGATT TAGTGATATT AGATGCAAAA GACTTAAAAG AATTAGCTGT TTATGAATTA
CCCATTTCAA TTCCTCATGG CCTTCATGGA TCTTGGGTTA ATTGA
 
Protein sequence
MTNLQDKKID KFKSFNKEDW SSAYQNVEKE LTKEPLKISK GNNIKNLNGT LLRNGPGILE 
RGGQWVHHPF DGDGMITSIK FENGQPFLTN RFVKTKGYLE EEKINKFIYR GVFGTQKNGG
ILNNALDLKF KNIANTHVVK LGDEILALWE AAGPHAMDPD SLNTIGLTTL KGVLKPNEAF
SAHPKTDLNS NASSELLVTF GVQTGPKSTI RLMEFNNAGT NSGELIFDRK DTLNGFAFLH
DFAITTNWAI FLQNAIDFNP LPFVMGQRGA AQCLKSNPNK KAKFFIIPRE SGLFRGQPPL
TIDAPEGFVF HHVNAFEKDS KIILDSIFYD DFPSVGPDEN FRDIDFDKYP EGKLKRSIID
LKKKTSELET LSEQCCEFAV VNPKNLGLTA TFSWMASTSQ KMGNAPLQAI KKINLTSKEE
ISWSAGPSGF VSEPIMVPSE NSSKEDEGFL FILLWNGERR GSDLVILDAK DLKELAVYEL
PISIPHGLHG SWVN