| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0281 |
|---|
| Symbol | |
|---|
| ID | 3765069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 269476 |
|---|
| End bp | 270051 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637796790 |
|---|
| Product | putative deoxyribonucleotide triphosphate pyrophosphatase |
|---|
| Protein accession | YP_396778 |
|---|
| Protein GI | 78778666 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0137227 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATT TATATTTAGC GAGTAAGAAT AAAGGTAAAA TTGAAGAATA TAAGAAATTG
CTTGCTGGAG TTAATTGTAA ATTATTACTC CAGCCAGAAT CATTAGAAGT TGAAGAGGAT
GGAATGACAT TTCGAGATAA TGCAATTAAA AAAGCGAGTG AAGTTTCTAG AAAAACAAAT
AATTTCTCAA TAGCTGATGA TTCAGGAATT TGTATTGAAG CACTAGATGG TAAGCCTGGC
ATTTACTCAT CTAGATATGC AGAAAATGAT CAGAAGAGAA TTGAACGAGT TTTAAAAGAA
CTTGATGGAG TTCAAAGTAG AAGTGCTTTC TTTATTGCCA ATATTTGTGT TTGTTCCCCA
AATGGTGAAG TGATTATTGA ATCTGAGGCC AAATGTCATG GCAATATTAT TTTAAACCCG
AGAGGGAAAG GTGGTTTTGG GTATGACCCA ATTTTTGAGG AGAGTTCTAC CAGATTAACT
TTTGCAGAAA TGAATAATGA TATTAAAGAC TCTTGTAGTC ATAGAGGTAA AGCATTAAAA
AAAATTATTC CAGATTTAAT TGAAATTTTT TCTTAA
|
|---|
| Protein sequence | MKNLYLASKN KGKIEEYKKL LAGVNCKLLL QPESLEVEED GMTFRDNAIK KASEVSRKTN
NFSIADDSGI CIEALDGKPG IYSSRYAEND QKRIERVLKE LDGVQSRSAF FIANICVCSP
NGEVIIESEA KCHGNIILNP RGKGGFGYDP IFEESSTRLT FAEMNNDIKD SCSHRGKALK
KIIPDLIEIF S
|
|---|
| |