| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0237 |
|---|
| Symbol | gatC |
|---|
| ID | 3765022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 228747 |
|---|
| End bp | 229040 |
|---|
| Gene Length | 294 bp |
|---|
| Protein Length | 97 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 637796743 |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit C |
|---|
| Protein accession | YP_396734 |
|---|
| Protein GI | 161350038 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit |
|---|
| TIGRFAM ID | [TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.342634 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAG TAACTAAAGA AGAGGTAAAA AAAGTTGCCC ATTTAGCAAG ATTGGAACTG
AACAAGGATG AAATTAATAA TCACGCAGAA CAATTAGAAA AAATATTGGA ATATATTAAA
CATCTTGAAA AAATTGATAC TGATGATGTG CCCTGTACAA CAAGAGCTAT AGAAGTTATT
AATGTATTTA GAAAAGACGA TAAGAAAAAT TCTGATTGCA CTGAAGAGAT TTTAGAGTTA
GGCCCATCTA GAGAAGATAA ATACTTTAAA GTACCAAAAA TTATGAATGA ATGA
|
|---|
| Protein sequence | MIKVTKEEVK KVAHLARLEL NKDEINNHAE QLEKILEYIK HLEKIDTDDV PCTTRAIEVI
NVFRKDDKKN SDCTEEILEL GPSREDKYFK VPKIMNE
|
|---|
| |