Gene PMT9312_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0169 
Symbol 
ID3764954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand- 
Start bp162335 
End bp162871 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content34% 
IMG OID637796676 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_396667 
Protein GI78778555 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.144569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCAGAAT TGAATTCTAA AGATATTTAT AAAATCGCTG TCGTAATGGG TAGTGATTCA 
GATCTAAAAA CATTGAAACC TGCTATTGAC ATTTTAAGAG AATTTGGAAT ACAAACTGAA 
GTTTGTATAC TTTCTGCCCA TAGAACACCT ATTGAGATGA TGGAATATGC AAAAAATGCA 
GAATCAGAAA AAATAAAAGT AATAATTGCC GGTGCTGGTG GTGCCGCTCA TCTTCCAGGA 
ATGTTGGCAT CGATAACTTG CATTCCTGTA ATTGGTGTAC CAGTAGAGAG TAAAACACTT 
AAGGGGATTG ACTCTCTTTT ATCAATTGTT CAAATGCCTG CTGGGATACC AGTAGCAACA 
GTTGCAATTA ATGGAGGTCA AAATGCTGGA TTATTGGCAA TAGAGATGAT CAGTTTATTT 
GATGAATCCA TAAAGAAAAA TTTAAAAGAA TTCAGAGAAA ATCTTCATAC ACAGGTAAGA 
ACTAAAAATA GTAAGTTATC AAATATTGGA GCGGACAATT ATCTTCAAAA TAAATGA
 
Protein sequence
MSELNSKDIY KIAVVMGSDS DLKTLKPAID ILREFGIQTE VCILSAHRTP IEMMEYAKNA 
ESEKIKVIIA GAGGAAHLPG MLASITCIPV IGVPVESKTL KGIDSLLSIV QMPAGIPVAT 
VAINGGQNAG LLAIEMISLF DESIKKNLKE FRENLHTQVR TKNSKLSNIG ADNYLQNK