Gene PMT9312_0136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0136 
Symbol 
ID3764921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp132653 
End bp133399 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content37% 
IMG OID637796643 
Producttwo component transcriptional regulator 
Protein accessionYP_396634 
Protein GI78778522 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGAT CTAGTCAAAC TAAAGAAACA ATCCTTGTCG CAGATGATGA GGCAAGTATT 
AGAAGAATTC TGGAGACGCG TCTCTCCATG ATTGGCTACA AAGTTGTAAC TGCAAGTGAT
GGTAAAGAAG CACTAAAGTT ATTTAAAGAT TATGAGCCTG ATCTAGTAGT ACTAGACGTC
ATGATGCCAA AGTTAGACGG TTATGGAGTG TGTCAAGAAT TAAGGAAAGA TTCTGATGTT
CCAATTGTTA TGTTAACTGC ATTAGGAGAT GTTGCAGATA GGATAACAGG TTTAGAATTA
GGAGCTGATG ACTATGTAGT TAAACCATTT AGTCCCAAGG AATTAGAAGC TAGAATTAGG
TGTGTTCTTA GAAGAATTGA CAAGGATCAA ATTCCTGGGA TGCCTAATTC AGGTTTGATT
TTGGTTACTG ATATAAAAAT TGATACCAAT AGAAGACAAG TTTTTAAAAG CGATGAGAGA
ATTAGATTAA CTGGGATGGA ATTTAGTCTC CTAGAGCTTT TGGTAAGTAG GTCAGGAGAA
CCATTTAGTA GAGGAGAGAT TTTAAAAGAG GTTTGGGGAT ATACACCTGA GAGGCATGTA
GATACAAGAG TAGTCGATGT TCATATATCG AGATTAAGGT CAAAACTGGA GGCCGATCCG
GCCAATCCTG AATTGATACT AACAGCAAGA GGCACAGGAT ATCTTTTTCA AAGGATTGTC
GATATTGCTC CTTTTGATGG TAAATAA
 
Protein sequence
MAGSSQTKET ILVADDEASI RRILETRLSM IGYKVVTASD GKEALKLFKD YEPDLVVLDV 
MMPKLDGYGV CQELRKDSDV PIVMLTALGD VADRITGLEL GADDYVVKPF SPKELEARIR
CVLRRIDKDQ IPGMPNSGLI LVTDIKIDTN RRQVFKSDER IRLTGMEFSL LELLVSRSGE
PFSRGEILKE VWGYTPERHV DTRVVDVHIS RLRSKLEADP ANPELILTAR GTGYLFQRIV
DIAPFDGK