Gene PMT9312_0067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0067 
Symbol 
ID3764850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp70791 
End bp72773 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content32% 
IMG OID637796571 
ProductABC transporter ATP-binding protein 
Protein accessionYP_396564 
Protein GI78778452 
COG category[R] General function prediction only 
COG ID[COG4178] ABC-type uncharacterized transport system, permease and ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAG CCGTTAAAAA TAAATCTAAA ATACTTTATC AATTACAAAA ATTAAGGAAA 
CTATCTCAGC CATTTTTTCT CCCAATAGAT CAATGTAATG GATTTCAATT CATATGGCTT
TTGATATCTC TTTTATTTTG TGTTGGGGGA ATAGTGCTTG TTGGTCTTAC AGGAATAATA
AGTTTTTTCG AAAACTTTCA ACCTATTTTT CTTGAAAAGT ATTTCGGCGG TGTAGTAAGT
ATTATCAATT CAATTTGGGC TGGGAGCTGG GGATTGCTTT TCTCTGCCTT ATTTCTAATT
GGATCAGGAA GCTTTTTTAG CTTAAGACTT CAATTAAAAA ACCGTAGATG GTTACATTGG
TTATTCCTTG CGATAATTGT ATTAATGCTT TTAGCTGTAA ACGGAATAAA CGCAGGAATA
GGATTTATAG CAAGAGATTT AACAAATGCT TTGGTAGAAA AGCAAGAAGA TGGATTTTAT
CGGATATTGG GGATTTACGC TTGTTGTTTT GCTGTTGCTC TACCAATACG TGTTTCCCAA
ATATTTTTTA CATATAAATT GGGAATAATT TGGAGAGAAT GGCTTTCAAA AAGTTTAGTC
AAAGATTATA TGACTAATAA AGCTTATTAC CAATTAAATC CCAATGATGA AGAGCAAACT
GATGTAGATA ATCCTGATCA AAGGATTACA GATGATACCC GAGCTTTTAC GGGGCAAAGC
CTGTCTTTTA CATTAGGTGT TTTTGATGCA CTACTCACAT TTTCGCTTAA TATTCTTATT
TTATGGAGTA TCAGTACAAC ACTTACTTTT TCTTTATTTG GTTACGCTGC ATTTGCAACT
TCTATCCTTT TAGTTGCTGG TAAAAATCTT GTAAAGATAG ACTTTGATCA ACTCAGATAC
GAAGCAGATT TTCGATATGG CTTGGTACAT ATTAGAGATA ACGCTGAATC AATAGCTTTT
TACGCCGGGG AAAATCCTGA GCGCAATGAA ACTGAAAGGC GATTAGGAGA AGTGGTAAGA
AACTTTAATT TACTGATTAT ATGGAGAGTA ATAATTGACG TTATGAGAAG ATCCATTAAT
TATGCTGGAA ATTTCTTCCC ATATTTAATA ATGGCAATAC CTTACTTTAA AGGTGATATT
GATTATGGGC GTTTTATTCA GGCAAGCTTT GCATTTGGCA TGGTCGAAGG TTCGTTATTT
TTCATTGTTA ATCAAATAGA AGAACTTGCA AAATTTACTG CTGGAATCGG AAGATTAGAA
GGATTCCAAT CAAAAGTCGA ATCTATTAGT CAAACTAACC CTATAAGCAA TCAAAACGTT
ATTTCAGATT ATCCCTCAAT TCTTATTAAA AATGCTGACC TTTATCCCCC AGGCTCGGAT
AAAAAAATTA TTAAGAATTT AAATTTGAGC ATCAATAATA ATCAATCACT TTTGGTTGTA
GGACCTTCTG GATGTGGAAA AACATCTTTG CTAAGAATGA TTAGTGGTTT ATGGGAACCA
GATCAGGGAG TAATAAAAAA ACCAAAAATT GGGGAATTAT TATTCATACC TCAGAAACCT
TATATGTTAC TAGGTTCTTT AAGGGAACAA TTATGTTATC CCACAGAAGT TCAAAAATTT
AGTGATGAAC ATCTTACTGC TGTACTTCAT GAAGTAAATT TAAAAACATT AGTGGATCGT
TATCCTAATC TTGATATCAA ACAAGATTGG CCAAGAATTC TTTCTCTAGG CGAACAACAA
AGATTAGCTT TTGCAAGACT TTTACTAAAT TCTCCAAGAT TTGCAGTACT TGATGAAGCA
ACAAGTGCTT TAGATATTGA TACTGAAAAA AAACTATATG GTTTACTAAA GGAAAGAGAA
CTATCTCTTA TTAGTGTTGG ACATAGACCT AGCTTAAAAG ATTTTCATGA AAATATTTTA
GAATTAAATG GACAAGGAGA CTGGAAATTA GTGACTTCTG ATAAGTATAA TTTTAAGGAT
TAG
 
Protein sequence
MNKAVKNKSK ILYQLQKLRK LSQPFFLPID QCNGFQFIWL LISLLFCVGG IVLVGLTGII 
SFFENFQPIF LEKYFGGVVS IINSIWAGSW GLLFSALFLI GSGSFFSLRL QLKNRRWLHW
LFLAIIVLML LAVNGINAGI GFIARDLTNA LVEKQEDGFY RILGIYACCF AVALPIRVSQ
IFFTYKLGII WREWLSKSLV KDYMTNKAYY QLNPNDEEQT DVDNPDQRIT DDTRAFTGQS
LSFTLGVFDA LLTFSLNILI LWSISTTLTF SLFGYAAFAT SILLVAGKNL VKIDFDQLRY
EADFRYGLVH IRDNAESIAF YAGENPERNE TERRLGEVVR NFNLLIIWRV IIDVMRRSIN
YAGNFFPYLI MAIPYFKGDI DYGRFIQASF AFGMVEGSLF FIVNQIEELA KFTAGIGRLE
GFQSKVESIS QTNPISNQNV ISDYPSILIK NADLYPPGSD KKIIKNLNLS INNNQSLLVV
GPSGCGKTSL LRMISGLWEP DQGVIKKPKI GELLFIPQKP YMLLGSLREQ LCYPTEVQKF
SDEHLTAVLH EVNLKTLVDR YPNLDIKQDW PRILSLGEQQ RLAFARLLLN SPRFAVLDEA
TSALDIDTEK KLYGLLKERE LSLISVGHRP SLKDFHENIL ELNGQGDWKL VTSDKYNFKD