Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0035 |
Symbol | |
ID | 3764816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 32419 |
End bp | 33582 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637796538 |
Product | soluble hydrogenase small subunit |
Protein accession | YP_396532 |
Protein GI | 78778420 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCATAC AACAAAAATT ATCATTGATG ATTCCTGGAC CCACCCCAGT TCCAGAAAAA GTTTTACAAG CATTAAGTAA GCATCCGATA GGACATCGCA GTAAAGAATT CCAAGATCTC GTAGAAAGTA CTACTAAAAA TTTACAGTGG CTTCATCAAA CTCAAAATGA TGTTCTAACA ATTACTGGTA GTGGAACTGC CGCAATGGAA GCTGGAATAA TAAATACCTT AAGTAAAGGA GATAAAGTAA TTTGTGGAGA AAATGGAAAA TTCGGCGAAA GATGGGTAAA AGTTGCTAAA GAATTTGGTT TAGAAGTAAT AAAAATTGAT TCCGAATGGG GTACTCCGCT TGATCCAGAA GAATTCAAAA AGGTATTAGA GGAAGATAAC CAAAAAGAAA TAAAGGGAGT TATTTTGACT CATTCTGAAA CCTCAACAGG TGTAATTAAT GATCTAGAAA CTATAAGTTC ATATATTCGC GAACACAATA CAGCTTTATC AATTGTTGAC TGCGTTACAA GTCTTGGAGC TTGCAATGTA CCAGTAGATG AATGGAAATT AGATATCGTT GCGTCAGGAT CACAAAAGGG ATATATGATA CCTCCAGGGC TTAGTTTTAT AGCAATGAGC CAAAAAGCAT GGGAAGCTGC AGAAAAATCT AATTTACCAA AATTTTATTT AAATTTAAAA TCCTACAGAA AGAGTCTTTT AAGTAACAGT AATCCATATA CTCCAGCAGT TAATTTGGTT TTTGCTTTAG ATGAAGCTTT AACAATGATG AGAGAAGAAG GCTTAGATAA CATTTTCAAC AGACACAATA AACATAAATT AGCAATGAGC AATGCTGTAA AGGCTTTAAA TCTAAAATTA TTTGCTGATG AAAAATATTT AAGCCCTTCA ATTACTGCAA TAGAAACTGG AGAAATGGAT GCTGAAGAAT TCAGAAAAAC AATAAAGAAT AATTTTGATA TTTTACTTGC TGGTGGTCAA GATCATTTAA AGGGGAAAAT ATTTAGAGTC GGCCACTTAG GTTATGTAAA CGATCGAGAT ATTATTACAG TAGTTTCTGC TATAAGTAAT ACACTTCTTG AGCTCGGTAA AATTACTGCC CAACAAGCTG GTGAAGCATT AGTTGTAGTA TCTAAGTATC TTGATGGAAA TTAA
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Protein sequence | MAIQQKLSLM IPGPTPVPEK VLQALSKHPI GHRSKEFQDL VESTTKNLQW LHQTQNDVLT ITGSGTAAME AGIINTLSKG DKVICGENGK FGERWVKVAK EFGLEVIKID SEWGTPLDPE EFKKVLEEDN QKEIKGVILT HSETSTGVIN DLETISSYIR EHNTALSIVD CVTSLGACNV PVDEWKLDIV ASGSQKGYMI PPGLSFIAMS QKAWEAAEKS NLPKFYLNLK SYRKSLLSNS NPYTPAVNLV FALDEALTMM REEGLDNIFN RHNKHKLAMS NAVKALNLKL FADEKYLSPS ITAIETGEMD AEEFRKTIKN NFDILLAGGQ DHLKGKIFRV GHLGYVNDRD IITVVSAISN TLLELGKITA QQAGEALVVV SKYLDGN
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