Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0013 |
Symbol | |
ID | 3764794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 16075 |
End bp | 16743 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637796516 |
Product | RNA-binding region RNP-1 (RNA recognition motif) |
Protein accession | YP_396510 |
Protein GI | 78778398 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTATTT TTGTTGGCAA TTTGCCTTTC CGCGCAGAGC GAGAAGATGT TTTACAGTTG TTTGCCCCTT TTGGTGAGGT TTTAAATTGT TCTCTTCCTC TTGAAAGAGA TACTGGAAGA AAAAGAGGAT TTGCATTCGT TGAGATGGCA GATGAAGCAA TTGAATCAGC AGCTATTGAT GGTTTGCAAG GTACAGAGCT TATGGGTAGA CCATTAAGAA TTAATAAGGC AGAGCCAAGA GGTTCTGGAG GGTCTCGTAG AGGAGGAAGA GGCGGTGGAA ATAATGGCGG CGGCTATGGC GGTGGCGGCT ACGGCGGTGG AAATAATGGC GGTGGCTATG GCGGTGGCGG TGGCGGTGGC GGTGGCGGCT ACGGCGGTGG AAATAATGGC GGCGGCTACG GCGGTGGCGG TGGTGGCTAC GGCGGTGGAA ATAATGGCGG CGGCTACGGC GGTGGCGGTG GTGGCTATGG CGGTGGAAAT AATGGCGGCG GCTATGGCGG TGGTAATCCT GAACCTAAAA CTTCTTATAC GAATAACTCC TCGGGAGCTG AAGGTTGGGA AGATAGAAGT TATGGAAACT CTTCTGAAAA CTCTGAATAT GAAAGTGGCA GAAGTAGGAG AAAAAGAGGA GTTTCAAACG AGAGTAATTT ATCAAATGAA GAGAATTAA
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Protein sequence | MSIFVGNLPF RAEREDVLQL FAPFGEVLNC SLPLERDTGR KRGFAFVEMA DEAIESAAID GLQGTELMGR PLRINKAEPR GSGGSRRGGR GGGNNGGGYG GGGYGGGNNG GGYGGGGGGG GGGYGGGNNG GGYGGGGGGY GGGNNGGGYG GGGGGYGGGN NGGGYGGGNP EPKTSYTNNS SGAEGWEDRS YGNSSENSEY ESGRSRRKRG VSNESNLSNE EN
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