Gene PMT9312_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0010 
Symbol 
ID3764791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp11818 
End bp13110 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content33% 
IMG OID637796513 
Productsignal recognition particle-docking protein FtsY 
Protein accessionYP_396507 
Protein GI78778395 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0552] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00064] signal recognition particle-docking protein FtsY 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA CTGATTCTGA TAATTCTCAA GAGTGGGCTG CACAAGCTTA TGCTCTTTTA 
AAAAAACGAC AAGAGGAGCA AAAACAAGAA TTACAGAAGC AAGAGGAGCA AAAACAAGAA
TTACAGAAGC AAGAGGAGCA AAAACAAGAA TTACAGAAGC AAGAGGAGCA AAAACAAGAA
TTACAGAAGC AAGAGGAGCA AAAACAAGGT TGGACTGCTA ATGATGCTAG CAATGAAAAT
CTGCTTGGCC CCCCTAAAAT CATTGATGAA CCTAAACTTG GAGATTTTGA TGATAATTTT
ACTTGGTCGG CAATGGTATT AGCTGCTCAA GGAAAAAAAA TAAATCAAAT ATCTATAGAT
GAAATTGATT GGTTAACTAA ATTAAGAAAA GGATTAGAAG AGACACGAAA AGGATTTGTT
ACTGAATTAT TGGATAAATT GGGAGATGAT CCTCTTACAC CTGAGTCTCT TGATGATTTA
GAGACTCTGT TAATTAGAGC TGATGTCGGT ATTGATTCAA CTGATAAAGT TATCAGTTCT
CTTAGAACAA AATTAAATGA AGAAGTTGTG GGTGGAGAAG CAGGAATAAA ATTCTTAAAG
AAAGAATTAA AATTAATTGT TGATAAACCA ATAAAAAACT CAGGTACTGA TCTTTTAATA
CCCCAAAAGG GTAAATTAAA TGTTTGGTTA TTAGTAGGAG TTAATGGGGT TGGTAAAACT
ACAACTTTAG GAAAATTGGC ATATTTGTCA TCAAGGAGTA ATTATAAAAC TTTGATAGCT
GCTGCTGATA CTTTTAGAGC TGCGGCAGTA GAACAACTTA AAGTATGGGG TGAAAGGAGT
AATGTTGATG TTATATCTAA TCAATCAAAA AATGCTGATC CAGCTGCTGT AGTTTTTGAT
GCAATTAATT CTGCACAAAA AAGAAATGTT GATCTATTAC TAGTTGATAC AGCAGGTAGA
TTGCAAACAA AAAATAATCT AATGGATGAA TTAGCAAAAA TAAAAAAAAT TATCGATAAA
AAGGTTCCAG ATGCAATCAT TGAATCATTA TTAGTGTTAG ATGCAAGTCA AGGTCAAAAT
GGCTTAAAGC AAGCAAAAAG TTTTGCAAAA TCAGCAAATT TAAGCGGAGC AATCATCACT
AAATTAGATG GCACTTCACG AGGAGGCGTT TCTTTAGCTG TATCTGAAGA AGTTAATTTG
CCTATAAGAT TTATTGGGGC TGGAGAAGGT ATAAAGGATT TGAGACCTTT TAATAGTTAC
GAATTTGTAG AGGCTATGCT TGCAGATAAA TAA
 
Protein sequence
MKNTDSDNSQ EWAAQAYALL KKRQEEQKQE LQKQEEQKQE LQKQEEQKQE LQKQEEQKQE 
LQKQEEQKQG WTANDASNEN LLGPPKIIDE PKLGDFDDNF TWSAMVLAAQ GKKINQISID
EIDWLTKLRK GLEETRKGFV TELLDKLGDD PLTPESLDDL ETLLIRADVG IDSTDKVISS
LRTKLNEEVV GGEAGIKFLK KELKLIVDKP IKNSGTDLLI PQKGKLNVWL LVGVNGVGKT
TTLGKLAYLS SRSNYKTLIA AADTFRAAAV EQLKVWGERS NVDVISNQSK NADPAAVVFD
AINSAQKRNV DLLLVDTAGR LQTKNNLMDE LAKIKKIIDK KVPDAIIESL LVLDASQGQN
GLKQAKSFAK SANLSGAIIT KLDGTSRGGV SLAVSEEVNL PIRFIGAGEG IKDLRPFNSY
EFVEAMLADK