| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0005 |
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| Symbol | |
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| ID | 3764786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 5916 |
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| End bp | 8357 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 637796508 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_396502 |
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| Protein GI | 78778390 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.44739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAGA AAAAATTCAC TTCTATCTCT CTCCAAGAAG AAATGCAACG TTCTTATTTG
GAGTATGCAA TGAGTGTAAT AGTTGGTCGT GCTTTACCCG ATGCAAGAGA CGGTCTTAAG
CCTGTACAAA GAAGAATACT TTTTGCAATG TATGAATTAG GTTTAACACC AGATAAGCCA
TTTAGAAAGT GTGCCAGAGT TGTTGGAGAT GTACTTGGAA AATATCATCC TCATGGAGAT
CAGGCAGTAT ATGATGCATT AGTCAGGCTA GTTCAAAATT TTTCAACTAA ATATCCTACT
CTAGACGGCC ATGGGAATTT TGGATCTGTA GATAATGATC CGCCAGCAGC AATGAGATAC
ACAGAGACCA GATTAGCACC GATATCACAT AAAGGATTTC TTGAAGAGAT AGATTCAGAA
ACAGTAAATT TCTCAAATAA CTTTGACGGT TCACAAAAAG AACCAGATGT TCTTCCAGCC
CAACTTCCAT TTTTATTATT GAACGGATCA TCAGGTATTG CAGTTGGAAT GGCAACAAAC
ATTCCCCCCC ACAATCTAGG GGAAATAGTA GATGGTTTAA TTGCTCTAAT CAACAATAAA
GAGGTAAGTA ATAAAAAACT TTCTAATATA ATTAAAGGAC CTGATTTTCC TACAGGGGGA
GAGTTAATTT ATAGTCGTGC AATAGAAGAA CTTTACGCCA CAGGAAAAGG TTCAATCACA
ATAAGAGGTG TCATAAATTC AGAAGCAATA AATTTAGGCA AAGGTAAACA TAAAAGAAAT
GCATTAATCA TTACTGAACT TCCTTTTCAA ATCAGTAAGG CAGGATGGAT TGAAAAACTA
GCAGAACTTG TTAATTCAAG CAAAATTAAT GGGATCTCTG ATATTAGGGA CGAAAGTGAT
AGAGATGGAA TGAGAATTGT AATAGAGTTA AAAAAAGATT CTAATGCTGA ACTTGTAATT
TCTAATTTAT ATAAAAAAAC TACTCTCCAA ACCAACTTTG GTGCCATTTT TTTAGCATTA
ATAAAGGGCA AACCTGTCCA ACTAAACTTA AAACAATATC TAAACTATTT TCTTGAATTT
AGAGAAGAAA CAATTAGAAA AAGAACTAAT TATTTTCTGA AAAACACTCT TGAAAAACTA
GAAATATTAG AAGGTTTATC TAAAGCAACA AAAAACATCA AAAAAATTAT CGAGATTATT
GAAGATTCAG AAAATTCTGC TGAAGCCAAA TCAAAATTAA TTGATATTTT CTACTTAAGT
GCAAAACAGG CAAATTCAGT TTTGGATATG CCTCTAAAAA AATTAACAAA TCTGGAAAAA
AATCAAATTG ATGAGGATAT AAGAAAATTA CAAGAAAAAA AAGATTATTT TCAAAATTTA
TTAAATGAAA GAAAATTATT ACTTGAATTA CTAGTAGATG AATTATTAAT ATTAAAGAAA
AAATATAATG TTAAAAGAAA AACAAAACTA CTTAAAAATA TTGATCAAAA TGAAGAATTA
GAAACAATTA ATAATCAGAT ATTAGAAGAC TTTATCAATA AAAAAACTAA ATTATTTATA
GACAACAGAT TATATTTAAG AAAGATGATT TTAAATAATT ATAAAAAATC GTTTGAAGAT
GTAAATAAAA TTATAGATAA TAAAAACATT CAAAAATTCA TATGTAATAT CGATAAAAAT
GTAAAAATAA TTGGGATCAC ATATACAGGA AAAGTTTTTC ATATTAATTG GGAGTCAAAT
ATTAATAATG ACTATAAATT AGATAAAAAA ATCATTGGGA ATATTGATCA AAATAAAATA
ATAAATTTTC ATTCAATAAA AAAGGGAATT AAAAATTATT TATGTATCTT AAATTCAGAT
GGAAGATTTA AAAAAGTTTT GTTTGATGAA GATATGATTA AAAGTAATAG ATGTTTCTCA
ATAACAAAAT TAAAAAATAA TATTAAAACA ATTGATTCAT TTATTTTTAG TGAAGAAAAA
AATTTAATAA TATTAACCTC AATAGGAAGA ATGTTTAAAT TTAATTTATC AAACAAATTT
TTAACCCCGA CTACTAAACA ATCGCAAGGA TTAATGCTTA CAAAACTTTT ACCAACTGAA
AAAATTGTAT CTTGTTGTTC ATATCAAAAT GGAGAAAATA TTTACTTAGT TTCTAGAAAA
GGGAAAATCT TTTGTATAAA TAGTAATGAA ATTTATTATG CCAATGAATA CAGTTTAGGA
TATTTAAATG AAATTACTCA ACTTAAAAAC GATTACTTCC TAAAAATTTT GCCGAGTAAC
CATTACCTTG ATATTGAAAC TAATAAAAAT AAATCTGCTA GGTTAAATTT TGATAAATTG
AATTTTAAAT CTAAGAAAAC AAATTTTTTA ATTGACTTTT TAAAATTAGA CGATGAGGAA
TATATTGAAA ATTGTTTTCA ACTCGAAAAC TTTCTTGACT AA
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| Protein sequence | MDKKKFTSIS LQEEMQRSYL EYAMSVIVGR ALPDARDGLK PVQRRILFAM YELGLTPDKP
FRKCARVVGD VLGKYHPHGD QAVYDALVRL VQNFSTKYPT LDGHGNFGSV DNDPPAAMRY
TETRLAPISH KGFLEEIDSE TVNFSNNFDG SQKEPDVLPA QLPFLLLNGS SGIAVGMATN
IPPHNLGEIV DGLIALINNK EVSNKKLSNI IKGPDFPTGG ELIYSRAIEE LYATGKGSIT
IRGVINSEAI NLGKGKHKRN ALIITELPFQ ISKAGWIEKL AELVNSSKIN GISDIRDESD
RDGMRIVIEL KKDSNAELVI SNLYKKTTLQ TNFGAIFLAL IKGKPVQLNL KQYLNYFLEF
REETIRKRTN YFLKNTLEKL EILEGLSKAT KNIKKIIEII EDSENSAEAK SKLIDIFYLS
AKQANSVLDM PLKKLTNLEK NQIDEDIRKL QEKKDYFQNL LNERKLLLEL LVDELLILKK
KYNVKRKTKL LKNIDQNEEL ETINNQILED FINKKTKLFI DNRLYLRKMI LNNYKKSFED
VNKIIDNKNI QKFICNIDKN VKIIGITYTG KVFHINWESN INNDYKLDKK IIGNIDQNKI
INFHSIKKGI KNYLCILNSD GRFKKVLFDE DMIKSNRCFS ITKLKNNIKT IDSFIFSEEK
NLIILTSIGR MFKFNLSNKF LTPTTKQSQG LMLTKLLPTE KIVSCCSYQN GENIYLVSRK
GKIFCINSNE IYYANEYSLG YLNEITQLKN DYFLKILPSN HYLDIETNKN KSARLNFDKL
NFKSKKTNFL IDFLKLDDEE YIENCFQLEN FLD
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