| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_1881 |
|---|
| Symbol | |
|---|
| ID | 3762714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurimonas denitrificans DSM 1251 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007575 |
|---|
| Strand | - |
|---|
| Start bp | 1960370 |
|---|
| End bp | 1961797 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | |
|---|
| Product | PAS/PAC sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_394390 |
|---|
| Protein GI | 78778075 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAA AATTAGATAT TTTAAAAAAT ATGCCAAAAT CAATTGTTCT AAAGAGTGAT
GGAAAGGTGG TTCTTGGTGT TTATGGTGGA AAAAAGAGTT TAAAAAAATT AAAATATCAA
AAGCTAAAAG ATATCTTTGA TGCAAAGGCT TACAAGAGAG TTAAAAAACT TAAGAAAAAA
AAGTCTAAGA GCTGCAATAT TAGCTGGGAT GGACGAGAGT ATGAGGTTTA TTTTAACTCT
AATATCTTTT ACTTTTACGA TATTACATCC TACTTTGAAG TTGAATCAAA ACTAAAACAG
AGTTTGGGCG AACTTACTTC TAAAAAAGAG GAGCTTCAAG CAGTTTTTGA TCTTGCTGCA
AACGGAATTT CTATCCTAGA TAGAAATGGA ATGTTTTTAT ATGCGAACAA GTTCTTTCAA
AATATGATGG AGTACACGAT GGAGGAGTTA TATAGCCACT CATGTATCTC TCTCTCATCT
GCTGAGTACG CAGCTCCATC AAAAACTGCA GTTGAAAAAG CGATAGAGTT TGGAAGTTTT
GAGAAGTTTA AAAAAGTTTG TGTTACAAAG TCTGGCATCC ATATAAACGC TAGTATGTCT
TTGGCATATC TGCAAAGCAG AGATGAAATT ATCATGATAA CTTCAGATAT TACAGAAGAT
ATTATGTACC AAGACAAACT AAAAAAACAA GTTGAGATAG AAGTCGCAAA AAGAACCCAG
CAACATGAGA TAATGTGTCA TCAGTCAAGA CTAGCTGCTA TGGGCGAGAT GATAGATTCT
ATTGCCCACC AATGGAGGCA ACCGCTAAAT AGCCTTGGCA TCATAGTCCA AGGGCTAAGA
CATATCTCAA GCCAGAAAAA TATAGATGTT AAGTTTTTAA AAGAGATAGA AGCAGAAATG
ATGCAAAAAC TAAACTACAT GTCCCAAACC ATTGATGACT TTAGTGTCTT CTTTAGGATA
ACTAAGCAAA AAGAGAGTTT TAACCTTTTA CAAAGCATAG AAGATGCCAT AAGACTTATA
GAGATACAAC TGAAAAACTA TACTATTGCT ATAGAGATAA CAAAAGATGA GAGCTTAGAT
TTGAGCATTT TAGGTTTTGC AAATGAGTTT AGGCAAGTTA TATTAAATAT GATAAATAAT
GCAATGATGG CGATAGTCTC AAGAAGTGTG CAAAATGGCA AAATAGGGAT ACTCATAAAA
AGAGTAAAAG AGAATTTTCA AATAGAGATA GTTGATAATG GTGGAGGAAT CTCTAAAGAG
GATATGCCAA AGATATTTAA TCCATACTTT ACAACAAAAG ATAAAGGAAG CGGAATAGGG
CTTTATATGT CAAAAGTGAT TATAGAGAGC CACATGAATG GACTCTTGAG GGTCAAAAAC
ACTAAAGATG GTGCGAAGTT TACTATTATG CTAAAAAAAG GTTATTAA
|
|---|
| Protein sequence | MMKKLDILKN MPKSIVLKSD GKVVLGVYGG KKSLKKLKYQ KLKDIFDAKA YKRVKKLKKK
KSKSCNISWD GREYEVYFNS NIFYFYDITS YFEVESKLKQ SLGELTSKKE ELQAVFDLAA
NGISILDRNG MFLYANKFFQ NMMEYTMEEL YSHSCISLSS AEYAAPSKTA VEKAIEFGSF
EKFKKVCVTK SGIHINASMS LAYLQSRDEI IMITSDITED IMYQDKLKKQ VEIEVAKRTQ
QHEIMCHQSR LAAMGEMIDS IAHQWRQPLN SLGIIVQGLR HISSQKNIDV KFLKEIEAEM
MQKLNYMSQT IDDFSVFFRI TKQKESFNLL QSIEDAIRLI EIQLKNYTIA IEITKDESLD
LSILGFANEF RQVILNMINN AMMAIVSRSV QNGKIGILIK RVKENFQIEI VDNGGGISKE
DMPKIFNPYF TTKDKGSGIG LYMSKVIIES HMNGLLRVKN TKDGAKFTIM LKKGY
|
|---|
| |