Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Suden_1880 |
Symbol | |
ID | 3762713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurimonas denitrificans DSM 1251 |
Kingdom | Bacteria |
Replicon accession | NC_007575 |
Strand | - |
Start bp | 1959697 |
End bp | 1960368 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | two component transcriptional regulator |
Protein accession | YP_394389 |
Protein GI | 78778074 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAGCCA TACATAAAAA ACTACACTCC CTTACTCTTT TGATTGCAGA AGATGATGAG AGCACTCTAA AGTGGCTTAG TCGTGTTTTG TCCATCTATT TCAAAGAGGT TAGAGTTGCA AAAGATGCCA TGGAGGCTTT AGAGCTTTTT GAACAAACTC CATCTGATGT TATCATCTCA GATATCCAGA TGCCACAAGT CGATGGTTTG CATCTTCTGC AAAAGATATC ACTACTCTCT CCAAGTACCA CGAGAGTTGT CATGACAGCT TACAATACCC CAGAGTACAT TAACAGAGCG GTAGAGTCAA ATGTTGATTT TTATCTTAAG AAGCCAATAG ATATAGATGA ATTTTTAGTC GCAATAGCTT CAAGTAGAGC TAAAGTAGAT GAGCAGGTGT TTTTTTTAAA TGAGGGCTAC ATGTATGACT ACAAACAGAA GTTAGTAAAA AAAGATGAGC AGAGTATAAA ACTAACAAAA AAAGAGGTTT TGCTTCTTGA ACTTTTGTTA AAAAACAGAA AATCTATAGT TAGTATAGAG CAGATTGAAC ATAGCGTTTG GGAGGAGAGT GTTAGTGATG ATGCTATTAG AATGGTGGTA GTAGGTATCC GAAAAAAACT CTATCAAGGT GTTATAGAAA ATGTTAAAGG GCTTGGATAT AGAGTAGAGT AG
|
Protein sequence | MQAIHKKLHS LTLLIAEDDE STLKWLSRVL SIYFKEVRVA KDAMEALELF EQTPSDVIIS DIQMPQVDGL HLLQKISLLS PSTTRVVMTA YNTPEYINRA VESNVDFYLK KPIDIDEFLV AIASSRAKVD EQVFFLNEGY MYDYKQKLVK KDEQSIKLTK KEVLLLELLL KNRKSIVSIE QIEHSVWEES VSDDAIRMVV VGIRKKLYQG VIENVKGLGY RVE
|
| |