| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_1641 |
|---|
| Symbol | |
|---|
| ID | 3763252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurimonas denitrificans DSM 1251 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007575 |
|---|
| Strand | + |
|---|
| Start bp | 1723231 |
|---|
| End bp | 1725153 |
|---|
| Gene Length | 1923 bp |
|---|
| Protein Length | 640 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | |
|---|
| Product | diguanylate cyclase/phosphodiesterase |
|---|
| Protein accession | YP_394153 |
|---|
| Protein GI | 78777838 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.320869 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAAAA AAAGAGAGTT AGCAATCTTT TTTCTACTTT TTGTGCTTGG GCTATTTTTA
GCATATACAT ATAATGACAT CACTAAAGCA AAAGAGACTA TCTTTGAGAC AATAGAAAAA
CATGAGATAG AACAAATCTC TTTAGTTTTA CAAAATATAC AAAAAGATAT CCATACAAAC
TATCAAATAA AAGATAAAGA TGATTTAATC TCTGTTTTTA AAGAACAAAA CAATAGAGAA
AGATATGAAC AAATCCTCTC CATAATGTTA TCTTCAGATG TAAAATATTC ATACATTCTT
TATAAAGATG ATACAAATAA ATTTAGATTT TTACTCGATG CATCAAAAAC CGATAAAGCA
AACTTCAACC AAAAATTTGA TATTGATTCA AAAGAGTATG AGATTATCTA CGACCTCAAA
GAGCCTCAAA TTATAAAACA GAAAAATGTT GAAAATCTTT ATGTAACTTA TCTCTACCCA
ATTATCAGCA ATGGCGTTGT TGTTGGATTT TTCAATATAG ACTTTACTAC AGATATAAAG
ATGATTATTT TAGAGTCCAT AAAACCATTA GAGGCCTTTT TTACAATTCT TACTATTTTT
ATATTTATAT TTATGGGTGT AACACTTATA CAAATTTTTC ACTACTTTAT GACTAAAAAA
AAGATTTTTA CAGATCCACT TACAGGTACA TTTAATAGAA ATTATCTCGA TGAGATAGAG
CATGTATTAA ACCTTGAAAA ATATAGTGTT GCCATGCTTG ATTTGGACAA ATTTAAGATA
ATAAACGATA CTTATGGTCA TAAAACTGGG GATTATGTCC TCTCACATGT AAGTACTTTA
TTTAAGAATT CAATTAGAGA GAGCGATATT TTAGTTCGTT ATGGCGGTGA AGAGTTTTTA
CTTCTTATAA ACAAAAGAGA CAAAACAGAG CCAAAAACAA ATATTTGTGA AAGAATAAGA
AGCAATGTCG CTAAAGAGAA CTTTTCGTAT GATGGACATG ATATAAAAGT GACTGTATCA
ATTGGTGTTC ACAAACACCC AGCCTTAGAG AAAAATCTCC AAGAGGCGAT AAAAATAGCA
GACAAAATGC TCTATGAAGC AAAAAGCAGT GGCAGAAACA AAATAGTAAT TTACGATGAA
AAACTAAACT CTCTCTCCTT ATCATCTTCA TCATCAAAAC ATTTGAGTTT TGTAAAAGAG
GCACTTGAAG AAGATAGAGT TACATGTTAT TATCAACCTA TCTATAACCA TCATACAGGA
GAGATTTTTA AGTATGAAGC CCTTGTAAGA ATCATCGCAA AAGATGGAAA AGTTATTCCA
CCTATGAGTT TTATGCCTCA CATAAAACTT ACAAATATGC ACTATAAGCT TACACAAAGA
GTTCTATCTA CTGTTTTTGA GAAATTTAAA GATAATAAAA GCCTTGTAAG TATAAATATA
AATTTCTCAG ATTTAATAAA TCCAGATATT GAAGAGAGCA TAGTAAAAGC ACTAAAATCT
AATCACCACT TAGCTTCTAG GGTAACTTTT GAGATACTTG AGAGTGATGA GATTGAAAAT
ATTGAGCTAT TTAAACAGAA GATTCATCTT CTTCATTCAC TTAAGGCAAA AGTATCTATT
GATGATTTTG GAAGTGGTTA CTCAAACTTT AAGAGCGTTA TTGATATTGA AGCAAATTTC
TTAAAGATTG ACGGCTCTTT GATTAAGAAC ATAGATGTAA ATGGCAAAGA TTTTAAAGTA
GTTAAGAGCA TTGTTCACTT CGCTGCACAG AGCAATATGC AGACAATTGC AGAGTTTGTA
CACTCAAAAG AGGTTTATGA GAAGCTTCTG CTCTTAGACA TAGACTATAT GCAAGGTTAC
TACATCTCTA AGCCAGAAGC TCATTTAATT TTAAAAGATG AGCTTTTTAA AACAGTTTCT
TAA
|
|---|
| Protein sequence | MVKKRELAIF FLLFVLGLFL AYTYNDITKA KETIFETIEK HEIEQISLVL QNIQKDIHTN
YQIKDKDDLI SVFKEQNNRE RYEQILSIML SSDVKYSYIL YKDDTNKFRF LLDASKTDKA
NFNQKFDIDS KEYEIIYDLK EPQIIKQKNV ENLYVTYLYP IISNGVVVGF FNIDFTTDIK
MIILESIKPL EAFFTILTIF IFIFMGVTLI QIFHYFMTKK KIFTDPLTGT FNRNYLDEIE
HVLNLEKYSV AMLDLDKFKI INDTYGHKTG DYVLSHVSTL FKNSIRESDI LVRYGGEEFL
LLINKRDKTE PKTNICERIR SNVAKENFSY DGHDIKVTVS IGVHKHPALE KNLQEAIKIA
DKMLYEAKSS GRNKIVIYDE KLNSLSLSSS SSKHLSFVKE ALEEDRVTCY YQPIYNHHTG
EIFKYEALVR IIAKDGKVIP PMSFMPHIKL TNMHYKLTQR VLSTVFEKFK DNKSLVSINI
NFSDLINPDI EESIVKALKS NHHLASRVTF EILESDEIEN IELFKQKIHL LHSLKAKVSI
DDFGSGYSNF KSVIDIEANF LKIDGSLIKN IDVNGKDFKV VKSIVHFAAQ SNMQTIAEFV
HSKEVYEKLL LLDIDYMQGY YISKPEAHLI LKDELFKTVS
|
|---|
| |