Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Suden_1442 |
Symbol | |
ID | 3763377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurimonas denitrificans DSM 1251 |
Kingdom | Bacteria |
Replicon accession | NC_007575 |
Strand | - |
Start bp | 1510677 |
End bp | 1511903 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | Outer membrane efflux protein |
Protein accession | YP_393954 |
Protein GI | 78777639 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00437405 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAG CACTTTTTTT ACTCCTGCCA ATGTTTATAC ATGCAGAGAG TTTAAAAGAT ATCTTAGAAT TTGCACATCA AAATAACTCC ATTTTAGAAT CAAAAAAATA TATAAAAAAC GCAAAAGAGA GTGAAGTTGC TTCAAAAAAA AGTGCTTACT ATCCAAAGAT AGGCATAGGC GCTTCATACA GAAATATAAG TGACGCATCT CTTTTTCAGA TAGAAGAGAC TTATGCTCTT TATGGCAAAT TTGAAGTAGA TATCTATGAT GGCGGTCTTA AATCTGCACT ACATGACAAA GCAAAAAATG AACTTTTATC AACTGCTCAC GATGAGTTAT CTACAAAAGA GAGCCTATCT CTTGAAATCA CAAAGAATTT TTACACTATC TTAAGTCTAA AATCCCGCAT GAAAGCTCTG CTTGATGCAA AAGCCTCTTT AGGTGAGCAG TTACAAAGAG TTAAGCAGTT TTATGAGGCA AGGTTAGCGA CACAAGATGA TGTACAACGA CTTCAGGCTG CTTTTGATAA AAGTAGCTAT GAGATAGAGT CTCTTAACTT TGAGATGATA AGCGTTAAAA AATATCTAGA ATTAAAAGTT GGCAAAAGCA TAGATACTCT TGAGGTATCA AATTTTAAAG AGGTTGCCTC TTTGGAGTAT GAGCAGAGTG ACTCTATAAA GTCGTTAACA TATCAAGAGA GAGCTATAAA AAAGGGTGCA GAGGCACAAG ATGCTATCTA CTACCCAAAT ATAAAGTTAG AAGATATCTA TACTAAGTAT GAGTATGGAA CTACAACGCC AAACAATCCT CTTGCAATAG ATAAACAAAA TGTAGCAATG ATAAGTTTAA ATATGACCAT CTATGATAAC AGCGCTTCAG GCAAAGCAAG AGAGGCTCTT ATTCTAAATG CAAAAGCTCT AAATGAGGAG ATAAAATACC TCACAAATGA GCAAAAAGTA GAGCAGGAGA TAGCGCTTCA AAGGATTAAG AGTCAGAAGT TAAAGATAAA GAGTGCAAAG AGTTCTTCAG TTGCCTCAAG TAGTGCATTT GCTACAATAG ATGAGAAGTA CAAGGCTAGA GTTGTTGATT ATGTGACTTA TCTTGATGGG CTGAGTGCTA AAACAGAAGC AAAAGCTATT TATGAGAGTT CGTTAAACGA ACTTCAAATA GCTTATGCAA TCTACTACTT TTACAGTGGT AAAAAAATAG AGGAGTTTAT AGAGTGA
|
Protein sequence | MKKALFLLLP MFIHAESLKD ILEFAHQNNS ILESKKYIKN AKESEVASKK SAYYPKIGIG ASYRNISDAS LFQIEETYAL YGKFEVDIYD GGLKSALHDK AKNELLSTAH DELSTKESLS LEITKNFYTI LSLKSRMKAL LDAKASLGEQ LQRVKQFYEA RLATQDDVQR LQAAFDKSSY EIESLNFEMI SVKKYLELKV GKSIDTLEVS NFKEVASLEY EQSDSIKSLT YQERAIKKGA EAQDAIYYPN IKLEDIYTKY EYGTTTPNNP LAIDKQNVAM ISLNMTIYDN SASGKAREAL ILNAKALNEE IKYLTNEQKV EQEIALQRIK SQKLKIKSAK SSSVASSSAF ATIDEKYKAR VVDYVTYLDG LSAKTEAKAI YESSLNELQI AYAIYYFYSG KKIEEFIE
|
| |