| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_1387 |
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| Symbol | |
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| ID | 3763439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurimonas denitrificans DSM 1251 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007575 |
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| Strand | + |
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| Start bp | 1456405 |
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| End bp | 1458138 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | |
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| Product | type II secretion system protein E |
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| Protein accession | YP_393899 |
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| Protein GI | 78777584 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00517077 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAGAA TTACATCTGA CTTAGTGGCA AATGGCTCTA TTACCAAGAA CCAAGTTGAT
AGATTAGTAG CTAAGGGTAT TGATAGTAAC TTAATTTTAA GAGACATCAC CATATCTGGG
TTTATGACAA TGGATAGACT TATAGGATTT ATCGTTGATA AAATTCAAGA TGGAGAGTAT
CGTTTATCTA TAGTAAATAA CTATGATTAT ATTCAAGAAA AAGATGTTCT TATAAAATTA
GCTCAAAATT TAAATCTTAC ATTTCTAGAT TTAGACTCAA TAGATATGGA TTATAGAGTT
GTTGAGAAGA TTTCACTTAC ACAACTAAAA AAATATTATG CGTTTCCTAT CTCTGAGGAT
GAACTAAGTA TAACTGTAGC TTTTTGTGAT CCACTAAATA TAGAAGCAAA AGAGTCAGTG
CAGAGACTCT TTGCAAAAAA ACCTATAAAA ATCACTGTTG CGACTAAAGA GCAGATTGAT
TCTTACCTTT TTAAAGCAGA GTTAAAAGAT AGCATTAAAG AGCTTGTAAA AAAAATCAGT
GACGAACTTA ACTCTATTAG TTCATTAGAT GAGCAGCAAA AGTCTTCATC TATACTTCTA
TTAATTGATG TTATCTTAAG CACATGTATA AAAGATCGCT CTAGTGACGT GCATATTGAG
CCGACAGAAA AAAACTGTGT TATAAGAACA CGCATTGATG GTAAATTAGT GGAGATATTT
ATTTTCGAAA AAGATATATT TCCACCTCTT GCTTCCAGAC TTAAGCTCTT AGCAAATCTA
GATATTGCAG AGAAAAGAAA ACCTCAAGAT GGACGCTTCT CTATAATGGT TGGTACAAGA
GATTATGACT TTCGTATCTC AACACTACCG ATTTTGTATG GTGAATCAAT TGTTATGAGG
GTTTTAGATA AACAAAAAGC TCTTGTAAGG CTTGAAGATG CTGGCATGGA TTCTCTTAGT
TATCAAAAAT TTTTAAAATC ACTACAAATT CCTTACGGAC TCATACTTGT AACTGGTCCA
ACTGGAAGTG GAAAAACAAC TACACTTTAT GGTGCTTTAA ATGAGCTTAG AAATATTGAA
GATAAAATAA TAACTGTTGA AGACCCAGTT GAATATAGGA TGAACCTAAT CCAACAAGTA
CAAGTAAACC CAAAAGTAGG TCTTACATTT GCAACAGCTC TTCGTTCTAT TCTAAGACAA
GATCCTAATA AGATAATGAT TGGCGAAATT CGTGATTCAG AAACGTTAGA AATCGCTATA
AAAGCTTCAT TAACTGGTCA CTTGGTATTA TCAACCCTTC ATACAAACAA CTCAATAAGT
GCAGTTACTC GCATGGTAGA TATGGGTATT GCTCCCTATC TTATCAGTGG CTCTTTAGTA
GCCATACAAG CGCAAAGGCT TGTTAGAAAA ATCTGCCTTA ATTGTAAAGT AGAAGATAAA
GTTTCATCAT CTGCCTTTGA AGAAGTAAAA AATTTAGCTC CAGCTCATAG CAAATTTTAT
ATTGGCAAAG GGTGTAAAGA GTGTAGAGGG AGTGGGTATC TTGGGCGAGA GATGATTTGT
GAAGTTTTAG TCATCAATGA GAAAATATCA TCCCTAATCG CAAAAAACGC ATCTGCACAA
CTCATACATG CTCAAGCTCT TGAAGATGGA TTTATAGACC TACTTCAAAA CGGTATTGAC
AAAGCTCTTT TTGGAATTAC TACTTTAGAA GAAGTTTTAA GGGTGGCTAA ATAA
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| Protein sequence | MDRITSDLVA NGSITKNQVD RLVAKGIDSN LILRDITISG FMTMDRLIGF IVDKIQDGEY
RLSIVNNYDY IQEKDVLIKL AQNLNLTFLD LDSIDMDYRV VEKISLTQLK KYYAFPISED
ELSITVAFCD PLNIEAKESV QRLFAKKPIK ITVATKEQID SYLFKAELKD SIKELVKKIS
DELNSISSLD EQQKSSSILL LIDVILSTCI KDRSSDVHIE PTEKNCVIRT RIDGKLVEIF
IFEKDIFPPL ASRLKLLANL DIAEKRKPQD GRFSIMVGTR DYDFRISTLP ILYGESIVMR
VLDKQKALVR LEDAGMDSLS YQKFLKSLQI PYGLILVTGP TGSGKTTTLY GALNELRNIE
DKIITVEDPV EYRMNLIQQV QVNPKVGLTF ATALRSILRQ DPNKIMIGEI RDSETLEIAI
KASLTGHLVL STLHTNNSIS AVTRMVDMGI APYLISGSLV AIQAQRLVRK ICLNCKVEDK
VSSSAFEEVK NLAPAHSKFY IGKGCKECRG SGYLGREMIC EVLVINEKIS SLIAKNASAQ
LIHAQALEDG FIDLLQNGID KALFGITTLE EVLRVAK
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