| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_1280 |
|---|
| Symbol | |
|---|
| ID | 3763603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurimonas denitrificans DSM 1251 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007575 |
|---|
| Strand | - |
|---|
| Start bp | 1349827 |
|---|
| End bp | 1352496 |
|---|
| Gene Length | 2670 bp |
|---|
| Protein Length | 889 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_393793 |
|---|
| Protein GI | 78777478 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0531421 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAATATA TATTAGTTTC GTTACTGCTC GCTTCACTTT TACAAGTTTT TTTATGGCTA
AATAACGATA AAAAATTCAT AACTCCTCCT GATGCCGATG ACATTATAGA GTCTCTCTCT
TACGCTCCTT ATCAAAAAGG TAATGAGAAA GAGATGCTTA GTGATGAAGA GGTTATTAGA
GATTTAACCC TTTTAAAAAA GTTCACAAAT ACTGTGCGTT TATACTCTGC TGATGATTCG
CAAAAAGTTA TGCCACACTT AAGTGCTCTT GGTATGAAAG CGCACATGGG TCTTTGGCTC
TCAGGAGTTG TTGAGGATAA TGAAAAAGAG ATAGCTTTAG CAAAGAGTCT TATAGCGGAG
TATCATCAAA ATCTTATATC TGTAATTGTT GGGAATGAGG TTCTTTTACG CGATGATTTA
GATCCAGATG AGTTAATTGT TCATATAAAA GATTTTAGAG AGTTTATAGA TATTATACAA
AAAGTAGAAA AAGAGGATAG AGAAAAAGCA ATTCAAGAAG AGATTGCAAA AGAGAAAAAT
AAAAAAGTAA GAGCTAAAAA ACTCAAAGAA GCAAAAGCGA ATGCTGCTAA AGAAGAGAAG
CACACTATTT TAGTAACAAC AGCTGAAATT TGGAACATGT GGTTATTATA CCCATATTTA
GCCGATGAAG TTGATATTAT AAATATACAT ATACTTCCAT ATTGGGAGAA AATTAAAGCT
GAGGATTTTG AGTCATTCTT TAATGAAAAA TATCAAAAAA TAAGAGATGT ACACCCAACA
AAACCTATAA TAGTAGGAGA GTTCGGATGG CCTAGTAGAG GGTATAATAA TCAAGCTTCA
GTAGCAAGTC CTCAAAATCA GGCAATGGTT ATTAGAAAAT TCTTAGGGCT TGCAAAAAAA
GAGGGTTTTA GTTATAACCT TCTAGAGGCA TTTGATCAGC CTTGGAAAGG TGTTGATGAG
GGAAGTGTTG GACAATATTG GGGTATTTTT GATGCAAATC GTCATCTAAA ATTTGAGCTT
CAAGGCGAAG TTTTGGTAGA GCCATTTTGG TTTATGCAGA TGGTTGCGGC TGCTATTATT
GGTGCGATAC TAACGTTCTT TGGATTAAGA AATCAAAATA TAAACTTTTT ACATGCTATG
ACTTATGGTT TAGCAGCGCA AGGTATCTCT TTTGGTATTG TAATGTCAGC TGTCTATCCG
TTTGTACATT ACATGAATTT TGGAACATGG GTTATGTGGG GAATGGGTAC TATTTTAATG
GTGCCTCTTA CTATGATAAC TTTGGCAAAG GCAAATGAAC TCTTTAAGTG TACAATTGGA
AGACCTCCTG AGAGGCTTAT ACCTCTTGAT TTAAAATCAG ATCATGTTCC TTTTGTAAGC
ATACATGTAC CTGCATATAA AGAACAGCCA GCTGTTTTAA AAGAGACTCT AGAAGCTCTT
GCAAATCTAA GATATACAAA TTTTGAAGTT TTAGTTATTA TAAATAACAC TCCAGAGGAT
TTTTACAAAA CACCTATTAA AGAGCTGTGT GAAGAGCTTG GTGAAAGATT TGTTTATCTT
GATATAGAGT GCACTGGCTT TAAAGCAGGA GCTCTAAATA GAGCGCTAGA ATTTACAAAT
CCTACATGTG AAATATTGGC AGTTATAGAC GCTGACTATG TTATAAAACC AAACTGGCTT
ATCGATTTAG TTCCTATTTT TGATGATGCA AAAGTGGCAC TTGTTCAAGC TCCGCAAGAT
CATAGAGATG GAAATGAATC ACTTCTAAAG AGAGCTATGA ACGCAGAATA TGCAGGATTT
TTTGACATAG GAATGGTTGA ACGTAATGAA GAAAATGCCA TAGTAGCACA TGGAACTATG
ATAATGGTAC GCAAGAGTGC TTTTGATGAA GTAGGGCAGT GGAATACTGA TACTATAGTT
GAAGATAGCG AGCTAGGTCT TAGACTATTT GAAGCTGGAT ATATAGGGCA CTACACAAAT
CGTAGATATG GACATGGATT GCTTCCTGAT ACGATAGAAG CGTTTAAAAA TCAGAGACAT
CGCTGGGCTT ATGGTGCTGT TCAAATTTTG AAAAAACATT GGGAACATTT TAAACCATCA
TCAAAAACAT TGACACGCTC TCAAAAGCAT CACTTTATTA CAGGGTGGTT TTTTTGGCTC
TCAGATGCAT TAGGAACAGT CACTTCAATA CTGAATATTA TTTGGGTTCC TGTAATTATA
TTTGTAGGCG TTACTATTCC TACTATTGCG CTGACTGTGC CAATTATTAC AGCATTTATA
GTAAATGTTA TTCACTCTTT TGTACTTTAT AGAACAAGAG TTGGCGCAAA TTTCTATCAC
TCTTTACTTA GTGCAATTGC TGCAATGAGT CTGCAACTGA CAATTTTTAA AGCCGTTTAT
GATGGATTTG TAAAAGATAG ACTTCCATTT AAGAGAACGG AAAAAGGTGG CAATAGTAAA
AGAAGTATTA GCAGTCCTGT AAAAAATGAG ATTATCTTAG CAACACTCTT AATTGGTTCA
TTTGTAGCAT TGATTATGAC AAATCATCAA AGGATTGTAG AAGTTTATAT ATTTTCTGCA
ACTATATTAA TTCAGAGTAT CCCATACCTC TCTGCTATAA TTCTTAGACT AATTGAGAAA
AGCTCTTATA AAAAGGCTAA TGACTCATAA
|
|---|
| Protein sequence | MKYILVSLLL ASLLQVFLWL NNDKKFITPP DADDIIESLS YAPYQKGNEK EMLSDEEVIR
DLTLLKKFTN TVRLYSADDS QKVMPHLSAL GMKAHMGLWL SGVVEDNEKE IALAKSLIAE
YHQNLISVIV GNEVLLRDDL DPDELIVHIK DFREFIDIIQ KVEKEDREKA IQEEIAKEKN
KKVRAKKLKE AKANAAKEEK HTILVTTAEI WNMWLLYPYL ADEVDIINIH ILPYWEKIKA
EDFESFFNEK YQKIRDVHPT KPIIVGEFGW PSRGYNNQAS VASPQNQAMV IRKFLGLAKK
EGFSYNLLEA FDQPWKGVDE GSVGQYWGIF DANRHLKFEL QGEVLVEPFW FMQMVAAAII
GAILTFFGLR NQNINFLHAM TYGLAAQGIS FGIVMSAVYP FVHYMNFGTW VMWGMGTILM
VPLTMITLAK ANELFKCTIG RPPERLIPLD LKSDHVPFVS IHVPAYKEQP AVLKETLEAL
ANLRYTNFEV LVIINNTPED FYKTPIKELC EELGERFVYL DIECTGFKAG ALNRALEFTN
PTCEILAVID ADYVIKPNWL IDLVPIFDDA KVALVQAPQD HRDGNESLLK RAMNAEYAGF
FDIGMVERNE ENAIVAHGTM IMVRKSAFDE VGQWNTDTIV EDSELGLRLF EAGYIGHYTN
RRYGHGLLPD TIEAFKNQRH RWAYGAVQIL KKHWEHFKPS SKTLTRSQKH HFITGWFFWL
SDALGTVTSI LNIIWVPVII FVGVTIPTIA LTVPIITAFI VNVIHSFVLY RTRVGANFYH
SLLSAIAAMS LQLTIFKAVY DGFVKDRLPF KRTEKGGNSK RSISSPVKNE IILATLLIGS
FVALIMTNHQ RIVEVYIFSA TILIQSIPYL SAIILRLIEK SSYKKANDS
|
|---|
| |