Gene Suden_1005 details

Gene Information

• Locus tag: Suden_1005
• ID: 3763907
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurimonas denitrificans DSM 1251
• Kingdom: Bacteria
• Replicon accession: NC_007575
• Strand: +
• Start bp: 1054732
• End bp: 1056831
• Gene Length: 2100 bp
• Protein Length: 699 aa
• Translation table: 11
• GC content: 39%
• Product: TonB-dependent receptor
• Protein accession: YP_393518
• Protein GI: 78777203

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.828736
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATAAAA TAAAGTTGAG TCTTTTGGCT GCATTGCTCT TAAATTCGCA AATAAGCGCA 
AGTGATACAG TAGAACTAGA GCAAATTAGT ATAGCTACAA AAACTTCAAA AAGTATAAAT 
GGAGTTGCGG CAACAGTTGA AGTAGTTACA CAAAAAGAGA TAGAGCAGAT GGGGGCGTAT 
AGTCTCAAAG AGATCATAGA AAGAGCACAA GGGTTAAATG TCATGTACGG TACATTTCCA 
AATGCCTCTT CAAAGAGCAA AGCTTCTATA ACCATAAGAG GAATGAGTGC AAACGGCACT 
CTTATTTTGC TTGATGGCAG ACGATTGGCA GGTGAAGTGC AAAACCCTTA CGACCTTGAG 
CGGATTCCTG CTTCTGTTGT TGAGCGCATT GAGATTGTAA AAGGTCCTAT GAGTTCACTT 
TATGGTGCAG ATGCTGTTGG AGGTGTTATA AATATCATCA CAAAAAGACC TAAAGATGCT 
CTTAAAATCG ATGCAGGTGC AAGATATGGG GCAAATGGTG ATGGTGAGGC AGATAGCTTA 
AATTTAAATC TCTCTATCCA AGATAAGATA GATAAATTTG CATATAGTGC GTATGCGACT 
ATGACTACTA CAAAACCATA CACTCAAAAA GAGAGCGAGA ATGTTTGGGC ACCAGTTCCA 
GGAAACAGAG TAGCTCCATC TGCTCATCCA AATCCAAATA TAAGCGGCAA TATAAAAGAC 
AGCTACAAAC AAGATGTAAC TTACCGTGAA GATAGTGATG TTTATACTTT AGGCTCAAGA 
GTGAGTTATG ACTTTTCATC AGATTTTACA CTTGGGTTTG ATGTTAACTA CTTTGTGGAG 
GAGCGCGAAG GAGCATATAT AGGCTACTTC CATCCATCTG CTTATGGGGT GCCTCTTTTT 
AATGTTCCTG TTAACTCAAG CGATAAGAAC AACCGCTTAG ATTTGAGTCT TGATGCTACT 
TATAAAGCTA TGGATGAGTT AGAGATAAAA GCAAGAGTTT ATAACAGCAA CTATGAAAAA 
AGAAATAAGA CTACAGCAAG AGAGTACGCT GCTATGGGGT ATGCAAGTGA GGAAGCATCT 
GCACAAAACG GTATGGATGC GGATGTGGAT ATAAAAGTAG CTGAACTTAG CGCACTATAC 
ATGGCAAGTG ATGAGCACTT AGTTACTATA GGAGGCGAGT ATAGAGAAGA GACAAGGGAT 
TCAAGTGTTT TTTCTCAAGC AAGTACCCTC ACTAGAAAAG AGATGGATTA TAAATCGTTT 
TATCTGCAAG ATGAGTGGCA GATGAGTGAA AAACTAAGCG CAATAGTTGG TGCTAGATAT 
GATGCGATAA GCAATGCAGA TTCAAAAGCA ACTTTTCGTC TAGGCGGTGT TTATGAGTTT 
GACAAAATGG CATCTCTTAG AGCAAATTTT GCGCAAGGGT ATAGAGTGCC AGATATCAGA 
GAGATGTATA TCTTTAAGCA GACTCCAGCA GGGCTTCAAG TTGGTGCCCA AGCAATGGGA 
TATGACTTAA AGCCAGAGTC CACAAACGCT TATGAGATAG GACTTGGTGG ACAAAATGGA 
GTTGTGAGTT ATGATTTGGT CTTTTTTTAC AATGATGTCA AAGATATGAT AGCTCAAACA 
ATGGGGCTCT ATGGTGGAAA TGCTGCTTAT ACATTTGAGA ATGTCGCAGA TGCAAATACT 
AAGGGTATTG AGTTGTCATT AAAGTATAAG ATAAGCAGTG ATTTGAGCAG CAGTTTCTAT 
TGGAGTGAAT TAAGAACAAA AAATGAAGCA ACAAAAAAAG ATTTAGAGTT TCAGCCAGAG 
AGAACTGTAA TGCTAGGAGT TGACTATAAG TTTACACATG CACTTAGCGG AGGCATTTTT 
GCAAAGTATA TAGGAGAACA GTACTATACA AATGTGTTAA ACAGAGGTGC GCCAAACGAG 
AGCCGTATGG AAGCAACAGC TGATGGATTC ACAACACTAG ATTTAAGAGG CGAATACAAG 
CTAAATAAAA CTTTTGATAT ATATGGAGGT ATAAACAATA TAACGGATGA AAAAGTAGAG 
GATGTACTTG GCTCAAATGT GGGCGTTTAC TATTTTGCAG GTCTAAGAGC ACACTTTTAG 

 

Protein sequence

MNKIKLSLLA ALLLNSQISA SDTVELEQIS IATKTSKSIN GVAATVEVVT QKEIEQMGAY 
SLKEIIERAQ GLNVMYGTFP NASSKSKASI TIRGMSANGT LILLDGRRLA GEVQNPYDLE 
RIPASVVERI EIVKGPMSSL YGADAVGGVI NIITKRPKDA LKIDAGARYG ANGDGEADSL 
NLNLSIQDKI DKFAYSAYAT MTTTKPYTQK ESENVWAPVP GNRVAPSAHP NPNISGNIKD 
SYKQDVTYRE DSDVYTLGSR VSYDFSSDFT LGFDVNYFVE EREGAYIGYF HPSAYGVPLF 
NVPVNSSDKN NRLDLSLDAT YKAMDELEIK ARVYNSNYEK RNKTTAREYA AMGYASEEAS 
AQNGMDADVD IKVAELSALY MASDEHLVTI GGEYREETRD SSVFSQASTL TRKEMDYKSF 
YLQDEWQMSE KLSAIVGARY DAISNADSKA TFRLGGVYEF DKMASLRANF AQGYRVPDIR 
EMYIFKQTPA GLQVGAQAMG YDLKPESTNA YEIGLGGQNG VVSYDLVFFY NDVKDMIAQT 
MGLYGGNAAY TFENVADANT KGIELSLKYK ISSDLSSSFY WSELRTKNEA TKKDLEFQPE 
RTVMLGVDYK FTHALSGGIF AKYIGEQYYT NVLNRGAPNE SRMEATADGF TTLDLRGEYK 
LNKTFDIYGG INNITDEKVE DVLGSNVGVY YFAGLRAHF