Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Suden_0948 |
Symbol | |
ID | 3763967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurimonas denitrificans DSM 1251 |
Kingdom | Bacteria |
Replicon accession | NC_007575 |
Strand | + |
Start bp | 988657 |
End bp | 991749 |
Gene Length | 3093 bp |
Protein Length | 1030 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | |
Product | Type I site-specific deoxyribonuclease HsdR |
Protein accession | YP_393461 |
Protein GI | 78777146 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000221808 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGATA ACATTACACT TGAACAAGTA ATACAACAAA ACTGTATCAA TCTTTTAAGC CATAAAGAGT TTGGATATAA GTTTATAACC AAAGAAGATA ATCTTATTTT TAGAGAAAAT AAAACCTCCA CCGTGCTTTT AAAAAAGATG CTTATAGAGA GACTTTATGC CTTAAATAGC TATGAGTACA AAGGGCAAAA CTATAAGTTT AGTGCTAATA ATATAGCCAA AGCAGTTGAA GACTTGGATG TATCTTTAAA TGAGGGATTA ATAGTAGCAA ATGAGAAAAT CACCAATCAT CTACTTTTAG GTACTAGTTA CGAAGAGAAC CTTGATGATG GCACTAAAAA AAGTTTCTCT TTTAGATACA TCGACTTTGA AAACATTGAA AATAACCACT TTTTTGTAAC AGAAGAGTTT ATAGTGGATC GTGCTAACCA AAACGAAATT ACAAAAACTA GAAGACCTGA TTTGATGGTG TTTGTAAATG GCATCCCACT AGTGGTAATT GAGCTAAAAA AATCAAGTCT AAATTATGAA AATGGTATCA AGCAGCTTGA AAAAGAGCAA AAAAAAGATG AAATACCGCA TCTGTTTAAA TATATCCAAC TAACTATTGC AGCAAATAGT AATGAAGCTA GATATGGAAC CATGGGAACA CCTTTAAAGT TTTATAGCTT GTGGAAAGAG GAAGAGAGCG AAAAGGCAAA AACAACTCTA AAAACGATGA TACAAAATAG AGAAGTAACT AGTCTGGACC TTACTTTATT TGCGCTTTTA TCGAAAGATA GGCTGTTAAG ACTTATAAGA CACTATATTT TATTTGATAA AAAAGTAAAA AAAGTGAGCC GTTATCAACA GTTCTTTGGA ATTGAAAAGA CACTTAAAAG AGTAGAAAAG ATAACAGATG GTATAAGAGC TGGTGGACTT ATCTGGCATA CTCAAGGAAG TGGTAAATCT CTGACAATGG TAATGCTTAC AAAACTTCTA AAATTAACTT ACACTAATGC AAAAATCATA GTAGTAACCG ATAGAGTTGA TTTGGATGAG CAGATTCATA AAACTTTTGA AAATACTGAC ATCAAAGCAG GAAGAGCAAG TAGTGGAAGT GATTTGATAG AAAAACTTCA AAGCGGTATA AGTGTGATTA CAACACTTGT ACATAAGTTT GAAAAGGTAA GAAACTCAAA AACTGTTATC AATGATAACA ATGTATTCGT GCTAGTAGAT GAGTCTCACC GTACTCAAGG TGGAGATTTG CACAATGCTA TGAAAAAAGC TCTACCTCTT GCTTGTTATC TTGGATTTAC AGGAACACCA CTTCTTAAAA AAGAGAAAAA TAAAAACAGT TTTTTAAAGT TTGGTGGTGA AATACATAGA TATACCATAG ATGACGCTGT AAAAGATGGA GCAGTTTTAC CATTGCTCTA TGAAGGAAGG CTTGTAGATC AAGAGGTACT TAGTCCGGAT GGATTGGTGC GAAAGTTCAA CATGATCGCA AGAGAGTTAA GTGATGATGC AAAAAGAGAT TTGCAGCACA AATGGGCGAG GTTTCAAAAA GTTGCATCAA GTGAGCAAAG ACTTGAACTA ATAGCACTAG ATATTAATGA GCACTTCAAA AAAACTTTAA AAATGTCAAA TAGTGGATTT AAAGCGATGT TTGCGACAAG TAGCAAGTAT GAAGCTATAA AATATCATGA GATTTTTGAA GAGTATGGAG ATATACGAAC TGCTTATGTA ATTTCAAGCA ATGAACATGA AGAACTAGAT GGTGGAAATA AAGAATATGT GGCAAAAGCA TGGCAAGAGA CTATCAAAAA CTATGGAAGT GAAGAAGAAT ATCTAAAATA TGTAAAAAAT GAATTTATTC ATGGTGATGA GATAGATTTA CTGATTGTTG TAGATAAGCT TTTAACTGGT TTTGATGCCC CAAGAGCAAG TACGCTTTAT ATAGATAAAC AACTAAAAGA ACATAACCTT TTACAAGCAA TTGCAAGGGT AAATAGACTT TATGATGGAA AAGATTATGG GTATATTGTT GATTATAGAG GGCTTCTAGG AGAACTAGAC CAGGCTTTGA CAAATTATGC TTCACTTGAT GGCTTTGATC CAGAGGATTT GACGGGAGCT GTAGTAGATG TAAGAAGTGA AATAGCAAAA GCTAAAACTT ATTACACCCA TTTAGAAGAC CTTTTTAGTG ATGTTAAATT CAAAGATGAT TTAGAAAGTT ATGTAGTTGT ATTAGCAGAT ATTCAAAAAA GAGATGATTT TAAAGAGTGG TTATCACACT TCTCTCGTGC TTTTAAATTA GGACTTTCTA GTGAAAAAAT CGATGACATT TTAAGTGAGA ATGAAATCAA GCTATACAAG AAAAAAATCA AATTTTACAA TGAACTCAGA AAAGTAGTGC AGCTACGATA TCACGAAACT TGTGATTTTG GAAAATATGA AGAGCAGATG CAAAAGCTAC TTGACACCTT TGTAAGTGCC AAAGAGGTGA ATGAGCTTAC AAAGCTTGTA AATATCTTTG AAACAGAGTT TGAAGAAGAG GTGCAAAGGG TTGAGGGTAA AAGTGCAAAA GCAGACACAA TTTTGAGTGC TGTAAGTGCT GTTGTAAAAG AAAAAATGGA ATCAAATCCA GCATTTTATA AGTCAATTGC CCAGCAAATA GAAGATGTAA TCAATGAATA TAACGCTAAA AGACTAAGCG AAGAGGAAAA ATTAGCAAAA GCAAAACAAT TAAAAGACTT AATGACAGGT ATGTCCAAAC CAAATGAAGA CAAATATCCA AAAGAGTTTG AAAATAAAAA AACTCTACTA GCTATATATG ATAATTTAGG TGACATTTTG GGTAACTTAG AAGTTGTTGA TTTTGAACTG ATTGTTAAAA ATTTGACTTT GAAATTTGAT GAAATTTATT CAGGAGCTTC TAAAAAACCT GAATGGCATA AAAATAAAGA TGTTGAAAAT GAAATAACAA GTGCAATGGA AGATGTTCTT TGGGATATAG AGGATGAATA TGATATATCA ATCGAAAACA AAGAAAAAAT TTATCAAACT ATTAGAGGTA TAGGGATAAG TTTTTATGCT TGA
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Protein sequence | MNDNITLEQV IQQNCINLLS HKEFGYKFIT KEDNLIFREN KTSTVLLKKM LIERLYALNS YEYKGQNYKF SANNIAKAVE DLDVSLNEGL IVANEKITNH LLLGTSYEEN LDDGTKKSFS FRYIDFENIE NNHFFVTEEF IVDRANQNEI TKTRRPDLMV FVNGIPLVVI ELKKSSLNYE NGIKQLEKEQ KKDEIPHLFK YIQLTIAANS NEARYGTMGT PLKFYSLWKE EESEKAKTTL KTMIQNREVT SLDLTLFALL SKDRLLRLIR HYILFDKKVK KVSRYQQFFG IEKTLKRVEK ITDGIRAGGL IWHTQGSGKS LTMVMLTKLL KLTYTNAKII VVTDRVDLDE QIHKTFENTD IKAGRASSGS DLIEKLQSGI SVITTLVHKF EKVRNSKTVI NDNNVFVLVD ESHRTQGGDL HNAMKKALPL ACYLGFTGTP LLKKEKNKNS FLKFGGEIHR YTIDDAVKDG AVLPLLYEGR LVDQEVLSPD GLVRKFNMIA RELSDDAKRD LQHKWARFQK VASSEQRLEL IALDINEHFK KTLKMSNSGF KAMFATSSKY EAIKYHEIFE EYGDIRTAYV ISSNEHEELD GGNKEYVAKA WQETIKNYGS EEEYLKYVKN EFIHGDEIDL LIVVDKLLTG FDAPRASTLY IDKQLKEHNL LQAIARVNRL YDGKDYGYIV DYRGLLGELD QALTNYASLD GFDPEDLTGA VVDVRSEIAK AKTYYTHLED LFSDVKFKDD LESYVVVLAD IQKRDDFKEW LSHFSRAFKL GLSSEKIDDI LSENEIKLYK KKIKFYNELR KVVQLRYHET CDFGKYEEQM QKLLDTFVSA KEVNELTKLV NIFETEFEEE VQRVEGKSAK ADTILSAVSA VVKEKMESNP AFYKSIAQQI EDVINEYNAK RLSEEEKLAK AKQLKDLMTG MSKPNEDKYP KEFENKKTLL AIYDNLGDIL GNLEVVDFEL IVKNLTLKFD EIYSGASKKP EWHKNKDVEN EITSAMEDVL WDIEDEYDIS IENKEKIYQT IRGIGISFYA
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