Gene Suden_0428 details

Gene Information

• Locus tag: Suden_0428
• ID: 3764561
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurimonas denitrificans DSM 1251
• Kingdom: Bacteria
• Replicon accession: NC_007575
• Strand: +
• Start bp: 429660
• End bp: 431825
• Gene Length: 2166 bp
• Protein Length: 721 aa
• Translation table: 11
• GC content: 36%
• Product: polynucleotide phosphorylase/polyadenylase
• Protein accession: YP_392944
• Protein GI: 78776629

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000339931
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAATATG ATATAAAAAT AGATTTAAAG AACAAAAATG AAGAGTACTC ATTTGGTGAA 
GTTGCAAAAC AAGCAAATGG AGCAGCATGG TTAAAGAGTG GAAATACTGT TATTCTTGCA 
ACAGTGGTAA TAGATGAAAC AGAGATAGTA AAAGATGATT TTCTCCCTTT GACAGTTCAG 
TATATAGAAA AAGCATACGC AGCTGGAAAA ATTCCAGGTG GGTTTTTTAA GAGAGAGACA 
AAAGCAAGTG ATTTTGAGAC ACTAACTTCT CGTATAGTGG ATAGGTCTCT GCGCCCGCTT 
TTCCCAAAAG GATTTGGACA TCCAACACAG ATAACTATTA TGGTATTTAG TGTTGATAAA 
GAGTCAGACC TTCAAGTATT GGCTCTAAAT GCTGCTTCAG CAGCTCTATA TGTAAGTGAT 
ATTGATATTA ACAAATCAGT ATCAGCTATA AGAGTTGCAA AGATTGATGG AGAGTTAATA 
CTAAATCCTA CACTCTCAGA GCTTGATAAA TCAACGCTAG ATCTTTATCT CTCTGGAACA 
AAAGAGGATC TTTTGATGAT AGAGATGAGA AGCAAAGGCG GAATCAAGGT TGATACAAAT 
CTTATGATAG ATCCATTAAT GGATCCAACT CTTAGCTCTG CTATTATTGC GACGCACGTC 
TCAAATGCAG TACCTGAAGA TGAACTGATA ACTATTTTAG CAAAGGCAGA AGAGCTTCTT 
TTTGAGACAA ATGCCATGTA TGAAGAGATG TTTAAAGAGT TTAAAAAAGA GACGTCACCC 
CTTGAATGTA AAGCACATGC ACTAAATGAA GAGATGCTTA AGTATGTACG CTCAAATCAT 
TACAGTGATA TAAAATCTGC TATGAACCAG ATGGCAAAAT CTGAACGCTC AACTGCTCTT 
AGACAACTTA GAAAAAAAAT CATCATAACA AAAGAAGAGT GGGATGAAGT TGAACTCAAA 
GATGTTATAG AGAGTGTAAA AAAAGAGCAG GTTAGAGGAC AAATTTTAAA CGATAGAGTT 
CGAGCAGATG GTAGAGCGCT AAATGAGATA AGACCAATAT CAATAAGCAC AAACGTTCTT 
CCAAGCGCTC ACGCATCTTG TCTTTTTACT CGTGGGCAGA CTCAAGCTCT TGTGGTTTTA 
ACAATGGGCG GACCAAAAGA TGCTCAAATG TTTGAAAACC TGACTGATGA GGGAACTCAA 
AATGAAAATT TCATGGTTCA CTACAACTTC CCTGGATTTA GCGTCGGTGA AGCATCTCCT 
ATCATGGGAA CAAAAAGAAG AGAGTTGGGG CATGGAAATT TAGCCAAAAG AGCGCTAGAG 
CCTATTGTAA ATCTTGAAGG GCAAACTGTA CGTTTAGTTT CAGAGATACT TGAGTCAAAT 
GGCTCTTCTT CTATGGCAAC TGTTTGTGGT GGATATATGG CACTTCGTGC TGCTGATATT 
GAGACAAGCG ATACGATAGC TGGAATTGCT ATGGGAATGG TAAGTGAGGG CGATAAATAT 
GCAATCCTCT CAGATATTAT GGGCTTGGAA GATCATGATG GAGATTTAGA CTTTAAAGTA 
ACTGGTTCAA AAGATGGTAT CACTGCTATG CAGATGGATA TAAAACTTGG CGGAATTAGT 
CTAAATATCT TAAAAGAGGC TCTTTATCAA GCTAAAGAGG GTAGAGCACA CATCATTAAT 
ATTATGCAAG AAGCAGAAAA AAATATTTCT TTCAATGATG GTGTACTTCC AAGTACAGAT 
TTTTTCCATA TAAATCCTAG TTTCATAGGC GATATTATCG GTCAAGCAGG AAAAACAATT 
CGTGAGATTA TAGAGAAGTT TGAAGTTGCA ATTGATATAG ATAAAAAAGA TGGAAAAGTT 
AAAGTAACTG GAAAGAGTAA GAGCGGTGTA CAAGCAGCAA GAGAGCATAT TGAGGGAATA 
GTAAGCACTC CAAAAATGCC AAAAATAGAG TATAAAGTAG GTGATATTCA CAAGGGTATA 
GTTAAGAAAA TAGTTGAATT CGGAGCTTTT ATAGAGCTTC CAGATGGAGT GGATGGATTA 
CTCCATATCT CTAAAATATC TGATCAAAGA GTAGAAAAGG TTAGTGATAT TTTAAAAGAG 
GGAGAAGAGA TAAATGTTGA AATCTTGGAA TTTAAAGGCA ATAAAATCTC TTTAGGAATC 
GCATAA 

 

Protein sequence

MKYDIKIDLK NKNEEYSFGE VAKQANGAAW LKSGNTVILA TVVIDETEIV KDDFLPLTVQ 
YIEKAYAAGK IPGGFFKRET KASDFETLTS RIVDRSLRPL FPKGFGHPTQ ITIMVFSVDK 
ESDLQVLALN AASAALYVSD IDINKSVSAI RVAKIDGELI LNPTLSELDK STLDLYLSGT 
KEDLLMIEMR SKGGIKVDTN LMIDPLMDPT LSSAIIATHV SNAVPEDELI TILAKAEELL 
FETNAMYEEM FKEFKKETSP LECKAHALNE EMLKYVRSNH YSDIKSAMNQ MAKSERSTAL 
RQLRKKIIIT KEEWDEVELK DVIESVKKEQ VRGQILNDRV RADGRALNEI RPISISTNVL 
PSAHASCLFT RGQTQALVVL TMGGPKDAQM FENLTDEGTQ NENFMVHYNF PGFSVGEASP 
IMGTKRRELG HGNLAKRALE PIVNLEGQTV RLVSEILESN GSSSMATVCG GYMALRAADI 
ETSDTIAGIA MGMVSEGDKY AILSDIMGLE DHDGDLDFKV TGSKDGITAM QMDIKLGGIS 
LNILKEALYQ AKEGRAHIIN IMQEAEKNIS FNDGVLPSTD FFHINPSFIG DIIGQAGKTI 
REIIEKFEVA IDIDKKDGKV KVTGKSKSGV QAAREHIEGI VSTPKMPKIE YKVGDIHKGI 
VKKIVEFGAF IELPDGVDGL LHISKISDQR VEKVSDILKE GEEINVEILE FKGNKISLGI 
A