Gene Tcr_2198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2198 
Symbol 
ID3762120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2425414 
End bp2425902 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content41% 
IMG OID637786947 
Productribonuclease P protein component 
Protein accessionYP_392460 
Protein GI78486535 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0594] RNase P protein component 
TIGRFAM ID[TIGR00188] ribonuclease P protein component, eubacterial 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000952989 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAACA ACACGCACCA AAATTCTGAT GGGGAGTTAT CGAGCTTGAG TCTAGACGAG 
CTTGAGTTAC CCCATCAAGA TTTCTCCCGA AATCATTTCC CTAAATCTCT ACGTCTTCTC
TCTCCACAAG ATTTCCAATT TGTATTCGCA CGCGCTGAAA AGTTTTCTAA TCGGCATTGG
ACCTTTATTG TCCGTCCGAA TGACAAGTCA TATCCCCGGT TAGGTCTTGC GATTGCTAAG
AAACAATTGG CAAAATCCGT TTGGCGTAAT CGAGTAAAAA GATTGGCAAG AGAGACATTT
CGTCAACATA AACAAGCATT AAGCGGGTAT GATATTGTCG TTTTGGGGCG ACGAGGCATG
CAAGACGTTG ATAATGAAAC CTTGATTAAA AGCTTTGAGC ATTTAATCCG TAAAATACAA
AAAAGCGGGT TAAAAGACGG GCAGCCGATG ACAAACACAA AAAAGTCACC GACTAAAGGC
TTAAAATAA
 
Protein sequence
MINNTHQNSD GELSSLSLDE LELPHQDFSR NHFPKSLRLL SPQDFQFVFA RAEKFSNRHW 
TFIVRPNDKS YPRLGLAIAK KQLAKSVWRN RVKRLARETF RQHKQALSGY DIVVLGRRGM
QDVDNETLIK SFEHLIRKIQ KSGLKDGQPM TNTKKSPTKG LK