Gene Tcr_2170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2170 
Symbol 
ID3761335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2392207 
End bp2392491 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content44% 
IMG OID637786919 
ProductATP synthase F0, C subunit 
Protein accessionYP_392432 
Protein GI78486507 
COG category[C] Energy production and conversion 
COG ID[COG0636] F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 
TIGRFAM ID[TIGR01260] ATP synthase, F0 subunit c 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.56588e-11 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCTC AATTTATTGC GGACATTTAC GCTGCTACAG CAATTGGTGT TGGTGTGATC 
TTGGCTGCGG CCGGTCTTGG TTCAGCTATC GGTTGGGGTC TAATTTGTTC TAAGACTCTA
GAAGGTATTG CACGTCAACC AGAAATGCGT CCTGCATTAA TGACTAACAT GTTCATTTTC
GCGGGTCTAA TGGAATCTTT CCCATTCATT ATCTTGGCAT TTGCTATGTG GTTCCTATTT
GCTAACCCAT TCGTTGGAGC AATGCAAGCT GCTTTAGGTG CATAA
 
Protein sequence
MEAQFIADIY AATAIGVGVI LAAAGLGSAI GWGLICSKTL EGIARQPEMR PALMTNMFIF 
AGLMESFPFI ILAFAMWFLF ANPFVGAMQA ALGA