Gene Tcr_2166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2166 
Symbol 
ID3761331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2388694 
End bp2389557 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content42% 
IMG OID637786915 
ProductATP synthase F1, gamma subunit 
Protein accessionYP_392428 
Protein GI78486503 
COG category[C] Energy production and conversion 
COG ID[COG0224] F0F1-type ATP synthase, gamma subunit 
TIGRFAM ID[TIGR01146] ATP synthase, F1 gamma subunit 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.95002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGCG GTAGTAAAGA AATACGAGCC AAAATTGGTT CCGTAACAAA TACCAAAAAA 
ATCACCAAAG CCATGGAAAT GGTGGCGGCT TCCAAAATGC GTAAAGCGCA AGCTCGCATG
GAAGCTACCC GCCCATATGT CGAAAAAGTG AAGAGAGTAA TTGACCACGT TTCAAGTGCT
CACCCTGAAT ATAAGCATCC TTATACTCAG GTAAGAGAGT CAGTGAAACG TGTTGCATTG
ATTATGGTTT CTTCTGATCG AGGCTTATGT GGTGGTTTAA ATTCAAACTT ATTCCGCAAA
GCATTGCCAT TACTTAAAAG ATGGCAGGAA CAAGGTGTAC AAGTTGAGCT TGCACTGGTT
GGTAGTAAGG CGCAGACATT CTTCAAAAGC TACGGCGGGA ATGTTGTTGC AACTGTAACT
GACCTGGGCG ATGCACCTCA TATTGATGAT TTAGTGGGAA CCATTAAAGT GGTTTTAGAT
CGTTTTGACG CAGGCGAAGT AGATGAAGTT CATCTTGCTT CAAATGAATT CGTGAATACG
ATGACACAAG ATCCAACAAT TAAGCAGCTT GTTCCTCTGC AATCTGATGA AACAACAAGC
GAAACGCATT GGGATTATTT ATATGAACCT GACGCTAAAA CAGCATTAAA CCTTTTAATG
CGTCGCTATG TTGAAAGCAC GGTTTTCGGT GCTGTTGTAG AAAATGCAGC CTGTGAGCAA
GGTGCTCGAA TGATTGCAAT GAAGAATGCG ACAGATAATG CGGGTGAGAT GATTAAAGAG
CTTAAACTGT CTTACAACAA GGCACGACAA GCAGCAATCA CAGCCGAACT TTCTGAAATT
GTGGCTGGTT CATCAGCTGT TTAA
 
Protein sequence
MAGGSKEIRA KIGSVTNTKK ITKAMEMVAA SKMRKAQARM EATRPYVEKV KRVIDHVSSA 
HPEYKHPYTQ VRESVKRVAL IMVSSDRGLC GGLNSNLFRK ALPLLKRWQE QGVQVELALV
GSKAQTFFKS YGGNVVATVT DLGDAPHIDD LVGTIKVVLD RFDAGEVDEV HLASNEFVNT
MTQDPTIKQL VPLQSDETTS ETHWDYLYEP DAKTALNLLM RRYVESTVFG AVVENAACEQ
GARMIAMKNA TDNAGEMIKE LKLSYNKARQ AAITAELSEI VAGSSAV