Gene Tcr_2158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2158 
Symbol 
ID3761323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2380870 
End bp2381361 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content40% 
IMG OID637786907 
Producthypothetical protein 
Protein accessionYP_392420 
Protein GI78486495 
COG category[S] Function unknown 
COG ID[COG1416] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATTA AACAATTACT TTCCATTTTG CTTGCAAGCA TCATTATGTT GCTAGGTGTC 
GCACAAACTG CACAAGCAGG AAAAACAGGG TACAGTCAGC AAAAAGTGGT TTATCACATC
AATTATGACG ATGCTAAAAA GCAATCAAGC ACTTTGCGAA ATATCCAAAA CCACATCAAT
GCGGTTGGCC CTGACAATCT TGATATCAGA GTTGTCATGC ATGGTAATGG ATTGTCCTTG
GTATTAAATG AAAGTGCTTT GAAAAACGTC CCTAAATTTA ATAAGGCCAA TGCATCCACC
ACGATGAAAC AAAAAATCGA CAGCCTCAAA ATGCAAGGCG TGACGTTCAA TGTTTGTGCA
AACACTGTTA AGGGCCGTAA AGTGAATATC AATCGAGATT TATATGATGT CGATCAAAAA
GATATCGTCG CCAGCGGCGT CGCAGAACTG GCTCATTTAC AGCAACAAGG ATTCGTTTAC
CTAAGACCGT AG
 
Protein sequence
MSIKQLLSIL LASIIMLLGV AQTAQAGKTG YSQQKVVYHI NYDDAKKQSS TLRNIQNHIN 
AVGPDNLDIR VVMHGNGLSL VLNESALKNV PKFNKANAST TMKQKIDSLK MQGVTFNVCA
NTVKGRKVNI NRDLYDVDQK DIVASGVAEL AHLQQQGFVY LRP