Gene Tcr_2153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2153 
Symbol 
ID3761318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2376280 
End bp2378352 
Gene Length2073 bp 
Protein Length690 aa 
Translation table11 
GC content48% 
IMG OID637786902 
ProductATP-dependent DNA helicase RecG 
Protein accessionYP_392415 
Protein GI78486490 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1200] RecG-like helicase 
TIGRFAM ID[TIGR00643] ATP-dependent DNA helicase RecG 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGCAC AACTTAAACT GACCACTTTA AAAGGAGTCG GTGACAAACT GGTAGAAAAA 
CTGAATCGCT TAGGACTTTT TCATGTCCAA GATCTACTCT TTCACCTGCC ACTACGCTAT
CAAGATAAAA CCAAGCTGAC CCCTGCTAGC CAATTACTGA TCGGACAAGA GGCCTTGATT
GAAGGCGAAA TCATCGGTCA GCACATGACA CAAAGCCGCA ACAGTAGCCT GATCGTCAAA
CTGGTAGACC CTTCCAACCA GCCGATTAGC TGCCGATTTT TTCACTTTCA TTATCGACAG
GCCCAGCAAT TCAAACGTGG GCTTAAATTA CGCGCTTACG GTGAAGTACG TTCCGGTCCA
AGCGGGTTAG AGATTGTGCA CCCAACCTAC CAACTGTTTA ACCCAGAAAG CCCGCCGCCG
TTGGAGGAAA CACTCACCCC GGTTTATCCA GTCACCGAAG GGTTGGGGCA ACCCACATTG
CTCAAACTGA TGCAACAAAC ACTGCAGCTG TTAAAACAAT ACCCGCTCGA AGAAGCCTTG
CCGCCTTCCT TACTGGAAGA GTTGAGACTT CCTCCAATCA ACCAGTCATT ACAGACCTTA
CATGAGCCGC AACCGGAAGA CGACCTGCTG CAAATCAAAC GGTTTGAACA CCCCGCGCAA
AGACGCTTAA TTTTCGAAGA ACTGTTAACC CATCAGCTAA GCTTACAACT CTTACGTCAA
CACGAAAAAC AACGAATCGC CCCTAAAGTT CCGGCCAGCG AGACGGCTTC ACGCTTATTA
AAAAACCTCC CGTTCAAACT GACCGGCGCA CAAAGTCGTG TCTTAAATGA CATTCAACAA
GATTTTAACC AGCCCCATCC CATGCAACGT TTGATTCAGG GAGATGTTGG GTCTGGAAAA
ACCATTATCG CTGCTCTTGC CGCCTTGCAA GTAGCCGATG CCGGGTATCA GGTGGCCGTC
ATGGCGCCTA CTGAAATTCT GGCCGAGCAA CATAAGAACC ACTTCCTTGA ATGGCTTGAC
CCTCTGGATA TTCCTGTTGC TTGGTTAAAC GGTCGAATGA AAGCCGCTGA AAAGCGAGAA
GCGCTCCAAA AAATTGAATC GGGCAAAGCC AAAGTCATTA TTGGTACCCA CGCACTTTTT
CAAGACAGTG TTACCTTTGA TCATTTAGGT CTTGTGATTA TCGATGAACA GCATCGCTTC
GGCGTGCACC AGCGGCTGGC ATTACATGAC AAGGGAACAC AAAATGACAG CCACCCCCAC
CAACTCATCA TGACAGCCAC CCCCATTCCC AGAACTTTAG CCATGACCGC TTATGGCGAC
TTGGACTTAT CCATCATTGA TGAGCTTCCG CCCGGCAGAC AACCGATTGA GACCGCTGTT
TTGAATAACA CCAAACGGTT TGAAGTCATG GAACACTTAC AGGCGCAATG CAAACAGGGG
GTTCAGGCCT ACTGGGTGTG TCCGTTAATT GAAGAGTCCG AACTACTGCA TGCTCAGGCA
GCCGAAGTGA CGGCACAACA ATTCATGGAT CACTGGCCCG ACTTACGCGT TGGACTGATT
CATGGTCGAC TAAAAGCGGA AGAAAAGACG GAACGCATGA GAGCGTTTAA AAACCATGAA
TTGGATCTTT TGGTGGCAAC GACCGTCATT GAGGTCGGCG TGAATGTACC CAACGCCAGC
TTAATGATTA TTGAAAATGC CGAGCGTCTT GGTTTGGCAC AACTCCATCA ATTACGCGGT
CGTGTCGGAC GAGGCAGCAA AAAAAGCCAT TGCGTCTTAC TCTATCAATC TCCAATGGGA
GAAACCAGTA AGGCACGCTT AAACATCATG CGAGAATCCA ATGATGGGTT TAAAATTGCA
GAAGAAGATT TAAAAATTCG CGGTCCTGGT GAAATATTAG GCACTCGACA AACGGGTGGA
TTACATTTTA GAATTGCGGA CTTAAAACGT GATCAAGCCA TGATTCCAGA AGTGAAGCAT
TACGCTGAAC TTTTAGTCCG TCAGCACATA GAGGTCGCGG ACGCCCTGAA TACACGCTGG
GTGGGAGAAA AAATGGATTA CAAGCATGCT TAA
 
Protein sequence
MLAQLKLTTL KGVGDKLVEK LNRLGLFHVQ DLLFHLPLRY QDKTKLTPAS QLLIGQEALI 
EGEIIGQHMT QSRNSSLIVK LVDPSNQPIS CRFFHFHYRQ AQQFKRGLKL RAYGEVRSGP
SGLEIVHPTY QLFNPESPPP LEETLTPVYP VTEGLGQPTL LKLMQQTLQL LKQYPLEEAL
PPSLLEELRL PPINQSLQTL HEPQPEDDLL QIKRFEHPAQ RRLIFEELLT HQLSLQLLRQ
HEKQRIAPKV PASETASRLL KNLPFKLTGA QSRVLNDIQQ DFNQPHPMQR LIQGDVGSGK
TIIAALAALQ VADAGYQVAV MAPTEILAEQ HKNHFLEWLD PLDIPVAWLN GRMKAAEKRE
ALQKIESGKA KVIIGTHALF QDSVTFDHLG LVIIDEQHRF GVHQRLALHD KGTQNDSHPH
QLIMTATPIP RTLAMTAYGD LDLSIIDELP PGRQPIETAV LNNTKRFEVM EHLQAQCKQG
VQAYWVCPLI EESELLHAQA AEVTAQQFMD HWPDLRVGLI HGRLKAEEKT ERMRAFKNHE
LDLLVATTVI EVGVNVPNAS LMIIENAERL GLAQLHQLRG RVGRGSKKSH CVLLYQSPMG
ETSKARLNIM RESNDGFKIA EEDLKIRGPG EILGTRQTGG LHFRIADLKR DQAMIPEVKH
YAELLVRQHI EVADALNTRW VGEKMDYKHA