Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_2149 |
Symbol | |
ID | 3761314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 2372159 |
End bp | 2373061 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637786898 |
Product | periplasmic solute binding protein |
Protein accession | YP_392411 |
Protein GI | 78486486 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCAATG TATTGAAAAC AAGTTGGTTA ATTGGGCTGG TGTGCATTAT GAGCTGGCAA TCTTATGCGG TTGCGAAACC TTTAAATGTG GTGGTGACAA CGGGCATGAT CGGAGATCTG GTCTCGAATG TTGGTCAAGA GCATGTAAAG ATGACGGCGT TAATGGGTGT GGGGGTGGAT CCACATTTGT ACAAAGCCAC ACACGGTGAT TTAAGGCGAC TGCAACAAGC GGATATGATT TTCTATAATG GATTGCATTT AGAAGGCAAA ATGCAGGATG TGTTTGAAAA GCTAGCGCGT AAAAAACCCG TTTATGCCGT GACTCAGGAT ATTGATGAGC ATCGATTGCA TCGATTTGGA AAAGCGCATG ACCCACATGT TTGGTTTGAT GTCGCGTTAT GGCATGCCGC CGGTCAACTC GTGTTAGAGA AACTGATTCA ACACGACCCT CAGAATGAAG CGAGTTATCG CCAAAATGCC GCACAGTATT TAAAGCAGCT ATCCGAGCTC AATCATTGGG TGAAGCAACA AATCAGTCAA ATTCCAAAAC AGCAGCGTGT TTTGATTACC GCACATGACG CGTTCGGTTA TTTCGGCACT GCTTATGATA TGGAGGTGCG AGGATTGCAG GGAATCAGTA CGGCGACCGA GTTTGGATTG CACGACATCA AAGCCTTAAA AGAATTGATT TTGACAAGAA AGATAAAAGC CGTTTTTGTT GAATCCAGCG TGCCGAAACG GTTTTTAAAA TCGTTGGTGG CTGGTGTGAA TGAAGTAGGT CAACCGCTTA AAATTGGTGG GGAGCTTTAT TCCGATGCGA TGGGCTTGTC TGGCACGCCG GAAGGAACCT ATATTGGTAT GGTCAAGCAC AATGTGACTG TTATTGTTCA GGCCTTGAAG TAA
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Protein sequence | MRNVLKTSWL IGLVCIMSWQ SYAVAKPLNV VVTTGMIGDL VSNVGQEHVK MTALMGVGVD PHLYKATHGD LRRLQQADMI FYNGLHLEGK MQDVFEKLAR KKPVYAVTQD IDEHRLHRFG KAHDPHVWFD VALWHAAGQL VLEKLIQHDP QNEASYRQNA AQYLKQLSEL NHWVKQQISQ IPKQQRVLIT AHDAFGYFGT AYDMEVRGLQ GISTATEFGL HDIKALKELI LTRKIKAVFV ESSVPKRFLK SLVAGVNEVG QPLKIGGELY SDAMGLSGTP EGTYIGMVKH NVTVIVQALK
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