Gene Tcr_2149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2149 
Symbol 
ID3761314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2372159 
End bp2373061 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content45% 
IMG OID637786898 
Productperiplasmic solute binding protein 
Protein accessionYP_392411 
Protein GI78486486 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAATG TATTGAAAAC AAGTTGGTTA ATTGGGCTGG TGTGCATTAT GAGCTGGCAA 
TCTTATGCGG TTGCGAAACC TTTAAATGTG GTGGTGACAA CGGGCATGAT CGGAGATCTG
GTCTCGAATG TTGGTCAAGA GCATGTAAAG ATGACGGCGT TAATGGGTGT GGGGGTGGAT
CCACATTTGT ACAAAGCCAC ACACGGTGAT TTAAGGCGAC TGCAACAAGC GGATATGATT
TTCTATAATG GATTGCATTT AGAAGGCAAA ATGCAGGATG TGTTTGAAAA GCTAGCGCGT
AAAAAACCCG TTTATGCCGT GACTCAGGAT ATTGATGAGC ATCGATTGCA TCGATTTGGA
AAAGCGCATG ACCCACATGT TTGGTTTGAT GTCGCGTTAT GGCATGCCGC CGGTCAACTC
GTGTTAGAGA AACTGATTCA ACACGACCCT CAGAATGAAG CGAGTTATCG CCAAAATGCC
GCACAGTATT TAAAGCAGCT ATCCGAGCTC AATCATTGGG TGAAGCAACA AATCAGTCAA
ATTCCAAAAC AGCAGCGTGT TTTGATTACC GCACATGACG CGTTCGGTTA TTTCGGCACT
GCTTATGATA TGGAGGTGCG AGGATTGCAG GGAATCAGTA CGGCGACCGA GTTTGGATTG
CACGACATCA AAGCCTTAAA AGAATTGATT TTGACAAGAA AGATAAAAGC CGTTTTTGTT
GAATCCAGCG TGCCGAAACG GTTTTTAAAA TCGTTGGTGG CTGGTGTGAA TGAAGTAGGT
CAACCGCTTA AAATTGGTGG GGAGCTTTAT TCCGATGCGA TGGGCTTGTC TGGCACGCCG
GAAGGAACCT ATATTGGTAT GGTCAAGCAC AATGTGACTG TTATTGTTCA GGCCTTGAAG
TAA
 
Protein sequence
MRNVLKTSWL IGLVCIMSWQ SYAVAKPLNV VVTTGMIGDL VSNVGQEHVK MTALMGVGVD 
PHLYKATHGD LRRLQQADMI FYNGLHLEGK MQDVFEKLAR KKPVYAVTQD IDEHRLHRFG
KAHDPHVWFD VALWHAAGQL VLEKLIQHDP QNEASYRQNA AQYLKQLSEL NHWVKQQISQ
IPKQQRVLIT AHDAFGYFGT AYDMEVRGLQ GISTATEFGL HDIKALKELI LTRKIKAVFV
ESSVPKRFLK SLVAGVNEVG QPLKIGGELY SDAMGLSGTP EGTYIGMVKH NVTVIVQALK