Gene Tcr_2146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2146 
Symbol 
ID3761311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2369084 
End bp2369971 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content49% 
IMG OID637786895 
Producthypothetical protein 
Protein accessionYP_392408 
Protein GI78486483 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGCG ATGTATGGAT TCTTGCAACC GCCAGTTTAG TGGCTATCAG TTGCGCTATG 
GTTGGGGTGT TTTTAGTGTT GCGTCGAATG AGTTTATTGG GCGATGCCAT CAGTCATTCC
GTGTTATTAG GGATTGTTCT GGCGTATTTG ATTGCGGGCA GTCGATCAGT GGTGGCGATG
ATGGTTGGCG CGACGTTGAT AGGTCTGTTG ACAGCTTGGC TTTCTAATGC TTTGCATCGG
GTCAGCAAGT TGCAGACAGA CGCCAGTATT GGGATTATTT TTACTTGGTT TTTTGCCTTG
GGGGTGATTT TAATTTCCAT TTATGCCGGT CAGGTTGACT TGGATCAGGA GTGTGTTTTA
TACGGTGAAA TAGCTTTTGT TCCCTTTGAT ACGGTTATTT GGGGAGGGCA AGAGCTGGGG
CCGCGCGCAC TGTGGATTAT TGGTGGCGTT TTTCTGGTGA ATCTCTTTTT GATTATATTG
GCCTTTGAGC GCTTTAAGTT GGTGGCGTTT CACCCGGCTT TGGCGCTTTC ACTGGGCGTT
AGTGTGTCGT TCTGGCATTA TCTGTTAATG ACCATGGTGT CTTTAACAAC GGTTGCTTCA
TTTGATGCGG TGGGGGCCAT TTTAGTGGTG GCCTTGCTGG TGATTCCAGC CAGCAGTGCC
TACTTATTGG CCAGCTCCTT AAAGTCGATG TTATGGATCG CGGCAGGGTA TGCTCAAGCG
TCTGTCTTAT TGGGGTATGC CGTGGCGGTG TGGCTGGATA GTTCCATTGC GGCTTCCATT
GCAGTCATGG CAGGTGTGTT ACTGATGGTG ACGGTTGTGT TGTTGCAATG GCAAAAGCAA
CGACGGGGCC GCCAAGCAAA AGAAGCGATG TTGGGTGGAA CCCTTTAA
 
Protein sequence
MISDVWILAT ASLVAISCAM VGVFLVLRRM SLLGDAISHS VLLGIVLAYL IAGSRSVVAM 
MVGATLIGLL TAWLSNALHR VSKLQTDASI GIIFTWFFAL GVILISIYAG QVDLDQECVL
YGEIAFVPFD TVIWGGQELG PRALWIIGGV FLVNLFLIIL AFERFKLVAF HPALALSLGV
SVSFWHYLLM TMVSLTTVAS FDAVGAILVV ALLVIPASSA YLLASSLKSM LWIAAGYAQA
SVLLGYAVAV WLDSSIAASI AVMAGVLLMV TVVLLQWQKQ RRGRQAKEAM LGGTL