| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_2144 |
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| Symbol | |
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| ID | 3761309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 2364647 |
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| End bp | 2366806 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637786893 |
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| Product | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA |
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| Protein accession | YP_392406 |
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| Protein GI | 78486481 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCACCC CAACATCCCT TGATGGCTTA ATCGAAAAAG CATCGGTCTA TCTTAAGAAG
CGACATCTTA AGCAAATAAA AGCCGCTTTT GAGTTCGGGG CAGAGGCACA TAAAGGGCAA
ATGCGCAAAA CGGGGGGCGA CTATATCTGG CACCCTGTTG CTGTGGCCGA AATTCTAGCC
GACATCCAAC TCGATCATGA AAGTTTGATT GCTGCAATCT TACATGATGT GGTCGAAGAC
ACGCCTTATA CCAAACAGGA TATTATTGAT CGATTTGGCG AAAATGTGGC CGAAATCGTT
GACGGTGTCA CCAAACTGGG TAAGCTTGAG TTCGATAACC CTCAAGAAGC ACAGGCTGAA
AATTTCCGTA AAATGGTACT GGCGATGTCA CGCGATATTC GTGTCATCCT AATCAAACTG
GCCGACCGAC TTCATAACAT GCGTACACTG GGTGTGATGC GTCCCGACAA ACAACGTCGA
ATTGCACGCG AAACCCTTGA AATTTATGCC CCCATCGCAG CCCGCCTCGG GATCAATGCC
ATTCGTATTG AACTTGAAGA CCTTGGTTTT AAGGCCATGC ACCCGTTTCG ATTTGCCGTA
CTAGAGCGCG CCGTAAAAAA AGCCCGCGGC AACCGGGCCG AAATCGTCGA ACAAATCAAT
GAAGCGATTA CAAATCGACT GCATGAAGAA AACATTCCGG CCAACGTCAT CGGCCGTGAA
AAGCATTTAT ACAGCCTCTA TAAGAAAATG AAGTATAAGC ATCTCAGCTT TGATGAGATT
CTCGACATTT TCGCTTTCCG TGTTGTAGTA AACACCGCCG ACGAATGTTA TCGCGTGTTA
GGGTCGGTTC ACTCACTTTA CAAGCCATTT CCCGGTCGTT TTAAAGACTA TATCGCCATT
CCAAAATCCA ATGGCTATCA ATCTTTACAT ACTGTGCTTT TCGGTCCTTT TGGGGCCTAT
ATTGAAATTC AGATTCGCAC AAATGAAATG CATGAAGTGT CTGAACATGG AATCGCCGCA
CACTGGGTTT ACAAGCAAGA TGCCACCGAA GACGGTCGAG CGATCGAACA ACCGCTTTCA
GCTGTTGAAA TTCGAGCCCA AGAATGGGTA AAAAATCTAC TTGAAATCCA ACAAGGAGCG
GGTAACTCTT TAGACTTCTT GGAAAATGTC AAAATCGACC TTTTCCCAAA TGTGATTTAT
GTTTTTACCC CGAAAGGCGA CATCATTACA TTACCCGCAG GTGCGACGGC TGTCGACTTC
GCGTATGCCG TCCATACCAA TGTGGGACAT GGAACCGTTG GTTGTCGTGT CGATAAAAAA
CTCATCCCTC TTAGAACGCA TTTGGAAAGC GGTCAAACCG TTGAAATCAT TCGAAGCAAA
GAATTACAAC CCAACCCGTC TTGGTTACAA TTTGTCACGA CCGCCAAAGC GCGTTCACAA
ATCAGAGCGT TCTTAAAAAA CCAACAATCA GCATCTGCTC AGGCGCTTGG AAAACGACTC
CTTGAAAAAG GCCTACGCAA CTTCAATATG TCTTATACCG GTTTAACCGA TGTCATTCGC
GAAGGCATCG TGGTCGAATT TAAGCTGGAA AGTTGGGACC ACTTACTGGA AGAAATCGGT
TTAGGTAAAC GCCTAGCCAA TCTGGTTGCC AAACAAATTC ACGACGTTGT TCTCGGCTCA
GATGACTCAA TCTTCAAATC GCATACGACA GAAGACCCTT CTCAACCCTT GGTTATTTCT
GGAACCGAAG GAATGGCTGT TAATTATGCA GGTTGTTGTC ACCCTATTCC AGGGGATGAA
ATCATCGGAT TTATCAGCGC TGAAAAAGGG TTAGTGATTC ATCGACAGGA ATGTAAAAAT
GTTAAACAAT TCAAAAACCA CCCTGAAAAA TGGCTTGATG TGAATTGGGA AGAAAACATT
ACCCAAACCT TTGATGTCGA ACTGCAACTT GAAATTTTAA ATCGACGCGG CGCTTTAGCA
ACCGTGGCCA GCAACATTGC CGAAATGAAA ACAGATATTG ATCGAGTGCG CTCTGAAGAT
AAAGACGAAA CCTACAGCTT AATGAACATT GTCATCCGTG TTCACACCCG CAAACATCTA
GCCGATGTCA TGCGTAAATT AAAACGCCTC CCTATTGTTG AAAAGATTCA ACGACTCTAA
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| Protein sequence | MPTPTSLDGL IEKASVYLKK RHLKQIKAAF EFGAEAHKGQ MRKTGGDYIW HPVAVAEILA
DIQLDHESLI AAILHDVVED TPYTKQDIID RFGENVAEIV DGVTKLGKLE FDNPQEAQAE
NFRKMVLAMS RDIRVILIKL ADRLHNMRTL GVMRPDKQRR IARETLEIYA PIAARLGINA
IRIELEDLGF KAMHPFRFAV LERAVKKARG NRAEIVEQIN EAITNRLHEE NIPANVIGRE
KHLYSLYKKM KYKHLSFDEI LDIFAFRVVV NTADECYRVL GSVHSLYKPF PGRFKDYIAI
PKSNGYQSLH TVLFGPFGAY IEIQIRTNEM HEVSEHGIAA HWVYKQDATE DGRAIEQPLS
AVEIRAQEWV KNLLEIQQGA GNSLDFLENV KIDLFPNVIY VFTPKGDIIT LPAGATAVDF
AYAVHTNVGH GTVGCRVDKK LIPLRTHLES GQTVEIIRSK ELQPNPSWLQ FVTTAKARSQ
IRAFLKNQQS ASAQALGKRL LEKGLRNFNM SYTGLTDVIR EGIVVEFKLE SWDHLLEEIG
LGKRLANLVA KQIHDVVLGS DDSIFKSHTT EDPSQPLVIS GTEGMAVNYA GCCHPIPGDE
IIGFISAEKG LVIHRQECKN VKQFKNHPEK WLDVNWEENI TQTFDVELQL EILNRRGALA
TVASNIAEMK TDIDRVRSED KDETYSLMNI VIRVHTRKHL ADVMRKLKRL PIVEKIQRL
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