Gene Tcr_2115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2115 
Symbol 
ID3761296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2338452 
End bp2339159 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content43% 
IMG OID637786863 
Productcopper resistance B precursor 
Protein accessionYP_392378 
Protein GI78486453 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3667] Uncharacterized protein involved in copper resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACAC TGATTAAGAA ATTACCAATC GTTTTATTGC TTTTTACATC AACTTACAGC 
CATTCCTCTT TTGCGCTAAG CGAATACGAT CCTTTGCTGG CGAGTTTAAG AGTCAATCAG
CTGGAAAAAT CCACTCAACA AGGGGAACCG TTATCTTGGG ATGCGTCAGC CTGGGTTGGA
AAAAACTGGC ATAAGGTTTA TTTAACTTCC GAAGGCGAAT CCTCAAACGG TTCAACCGAA
TCCGAAAATC AGTTGTTATA CAGCACCCCT GTTGAACGAT TTTGGGATTT TCAGGCGGGA
CTAGGTTATG ACGAAACCCC CGAAAACAGC CAAACTTGGG GAATCGTTGG CTTTCAAGGC
TTAGCACCTT ACTTTTTTGA AATAAATTCG AGACTACTGG TTAACGACAA GAATGCCGGA
TTTCGCTTGG ATGCAGAATA TGAAGCGCTG TTCACACAAC GATTGATTCT GACGCCGAGC
CTTAAATTAA ATGCCTATAC ATCGGATGAT AAAAAGATGG GCATTGGTTC GGGTCTATCA
TCTACGGAAC TGGGGATGCG GCTACGTTAT GAATTTAGTC GAAAGTTTGC ACCTTACATT
GGTGTGAAAT GGAACCAGGC TTATGCAACA ACGGCTGATT ATAAAAAAGA GGAAGGCGCT
AAAACATCAG AAACCAGTCT GGTAGCAGGA CTGCGTTTTT GGTTTTAA
 
Protein sequence
MNTLIKKLPI VLLLFTSTYS HSSFALSEYD PLLASLRVNQ LEKSTQQGEP LSWDASAWVG 
KNWHKVYLTS EGESSNGSTE SENQLLYSTP VERFWDFQAG LGYDETPENS QTWGIVGFQG
LAPYFFEINS RLLVNDKNAG FRLDAEYEAL FTQRLILTPS LKLNAYTSDD KKMGIGSGLS
STELGMRLRY EFSRKFAPYI GVKWNQAYAT TADYKKEEGA KTSETSLVAG LRFWF