Gene Tcr_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2105 
Symbol 
ID3761286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2327682 
End bp2328629 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content38% 
IMG OID637786853 
Productcytochrome c, class I 
Protein accessionYP_392368 
Protein GI78486443 
COG category[C] Energy production and conversion 
COG ID[COG3258] Cytochrome c 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTAC TTAACAAATT ATTGATAATT ATTTTTGTCA GTTTACCTGT GCTGGTTTTG 
GCTGATAGTT TTAAAACATC TGAAGCTTAC CCTGAAGGTC AGCTTGGAAA AATGATACGT
CTGGGTGAAG AAGTGATGAG CAAAACTGAT ACTCATGACA TGACAAAAGA CTTAGTTGGT
AATCGTTTAC AGTGTAAGAG TTGTCATTTA CCAGGCAAAG ATGGGAAGCC CGGCACTTTT
CCAAGTTTAG GCACATTTAT TGGCACAGCA GCAGCTTTTC CGGCCTATTC ATCAAGAGAA
AAAACGGTTC AGACATTGCA AGATAGAATT AACAACTGTT TTATGCGTAG CATGAATGGC
AAGCGTCCGA TTATTGATAC GGAAGTCAGT ATTGCAATGG CTGCTTACAT TACATGGTTG
TCGGAAGGGA CTCCGATTAA AATGGATGCG AAGCGTCCTG TGAACCCAAA ATATTCAGAG
TTTTGGGTAA AGAATGCTAA GAAATTTGCC AAACTCCAGA AAAAAGCCAC ACACTTAAAT
TATCTGAACG GTCAAAAGCT TTATATACAA AAATGTAGCG TGTGTCATGG CAAAGAAGGT
GCCGGATTAT CTCACTTTCC ACCACTTTGG GGTGAAAAAA ATGGCCATTG GCTTTCTTAT
AACACAGGCG CAGGAATGAG CAAGCTTCAT AAGGCACCTG TCTGGATTCA AAAAAATATG
CCTTTAGGTC AAGGAGGTAC ATTGAACGAT AGGCAAGTAG CAGATATTGC TTTATATATT
AATGCTCAAC CCCGTGCCAA TTTTGATTTA CAGAACAGAT TACAAGACAG AAATGAAATG
GGGTATTACA ATTCAAAAAT ACAATCTGAG AAGCATTCAG TTCGAAGTAA TTTTCAAGAT
TTTGGTTTAA ATGTTGATGA GATTCGTGGA GACAAATTGA TTCCTTAA
 
Protein sequence
MRLLNKLLII IFVSLPVLVL ADSFKTSEAY PEGQLGKMIR LGEEVMSKTD THDMTKDLVG 
NRLQCKSCHL PGKDGKPGTF PSLGTFIGTA AAFPAYSSRE KTVQTLQDRI NNCFMRSMNG
KRPIIDTEVS IAMAAYITWL SEGTPIKMDA KRPVNPKYSE FWVKNAKKFA KLQKKATHLN
YLNGQKLYIQ KCSVCHGKEG AGLSHFPPLW GEKNGHWLSY NTGAGMSKLH KAPVWIQKNM
PLGQGGTLND RQVADIALYI NAQPRANFDL QNRLQDRNEM GYYNSKIQSE KHSVRSNFQD
FGLNVDEIRG DKLIP