Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_2088 |
Symbol | |
ID | 3761269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 2305610 |
End bp | 2306773 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637786836 |
Product | amidohydrolase-like |
Protein accession | YP_392351 |
Protein GI | 78486426 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3454] Metal-dependent hydrolase involved in phosphonate metabolism |
TIGRFAM ID | [TIGR02318] phosphonate metabolism protein PhnM |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACTC TACCGATATA TATTACCAAT GCCAATATTG TTTTGGCGGA AGATGTTTTA ACAAATGCAA GCTTATTGAT TGAAAATGGT TTAATTTCAG CGATCAATCC TGAAAACATA CCCGACCAAG TTCAAACCGT TGATGCACAA GGAAAAACGG TCATGCCAGG CATGATTGAT TTGCATTGTG ATGCCCTCGA AAAAGAGGTC GAACCTCGCC CAAATGTTCA CTTTCCAATA GATTTTGCTT GTGCCCAAGC AGATAAGCGC AATGCAGGCG CAGGGATTAC CACGGTATAT CATGCCTTGT CATTTGCCAA TGAAGAACTG GGCGTCCGCA ACAACCAATT TGCTAAGGAA ATCGCTGAGG CAGTTCACCA ATTTCAACCG CATGCCTTAG TTGATAATCG GGTGCATTGT CGTTATGAAA TTACCGACCC CACAGGGCTA CCAATCTTAA TGGAACTGAT GGAAAAGCGA TCCATGCACT TGGTTTCGTT AATGGATCAC ACCCCTGGAC AAGGTCAGTT TAAAGACTTA GCGGCGTATA AAGCCTATTT TGGAAAAAGC TACCAAAAAT CGGATGCAGA ACTAGATCAG TTTATTGCTC AAAAACAGCA ACAGGCAGAA GGTGCAATGG AACGTGTTGA GCAATTAGTC AAAATGGCAC ATGCTCAAGG TATTTCGGTG GCATCACATG ACGACGATTG TAAAGAACGC GTCGACACAA TGACCGCTCT CGGCGTCGAT ATTTCCGAGT TTCCAATCAA TATGGAAACC GCTGAATACG CTCGAGCAAA AGGCATGAAA ACGATTATGG GTGCTCCCAA TATTCTCCGC GGCAAAAGCC AATCGGGTTC TATGCGAGCT TTAGATGCTG TCAATGCCGG TGTATGTGAT TGCCTATGTG CGGATTACTC CCCTGCAACC TTGATCATGG CCGTTTTTAA ACTGGCTGAA GTTTCAAAGC TGACGTTGGC ACAGGCCATT CAACTGGTAA CTAAAAACCC AGCGGAGGCG GCAAAGCTGC ATGATCGCGG TGTCATTGAA GTTGGTAAAC GTGCAGACAT CATTATGATC GCCAATCTGG ATGGGCTGGT CCAGGTCTCT GATGTTTTTG TAGAAGGTGT TTTAGCCTTT AAGGCCAGTT ATGATCATGC CTAA
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Protein sequence | MNTLPIYITN ANIVLAEDVL TNASLLIENG LISAINPENI PDQVQTVDAQ GKTVMPGMID LHCDALEKEV EPRPNVHFPI DFACAQADKR NAGAGITTVY HALSFANEEL GVRNNQFAKE IAEAVHQFQP HALVDNRVHC RYEITDPTGL PILMELMEKR SMHLVSLMDH TPGQGQFKDL AAYKAYFGKS YQKSDAELDQ FIAQKQQQAE GAMERVEQLV KMAHAQGISV ASHDDDCKER VDTMTALGVD ISEFPINMET AEYARAKGMK TIMGAPNILR GKSQSGSMRA LDAVNAGVCD CLCADYSPAT LIMAVFKLAE VSKLTLAQAI QLVTKNPAEA AKLHDRGVIE VGKRADIIMI ANLDGLVQVS DVFVEGVLAF KASYDHA
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