| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_2086 |
|---|
| Symbol | |
|---|
| ID | 3761267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 2304022 |
|---|
| End bp | 2304858 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637786834 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_392349 |
|---|
| Protein GI | 78486424 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4107] ABC-type phosphonate transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAACG ACAAAATACT AGAAGTCCGT AATCTCTCAA AAGTATACGG AAAAGGGTGT
TCTAAATGTT TTGAGTCAAC AGGCCCCAAA CACGATACCA ATATTTGCCC GCATTGCGGC
TCAGTTGTCG CCGCACATGA CATCAGCTTT GACCTTTATC GAGGTGAAAT TCTAGGCATT
ATGGGTGAAT CCGGCTCTGG AAAATCCACC TCGATTAAAA ACCTATTTTT CGATGAAATG
CCTACGTCGG GACAAGCGAC CTTTTTTGAT CAGGGTAAAC AGTATGATTT GTTTAAATTA
AACGCACAAC AAAAACGTCA CTTACGCAAT CATCACTTCG GTATGGTCTA TCAAAACCCC
GTATTGGGTT TGAACTTTAA TGTCTCTGCG GGTGGAAACA TTGCCGAACG CCTATTAATG
AACAATATAA CCCATTATTC CGATATTCGC GACAGAGCGA TTGAGTTACT CCGCCGTACC
GAAGTGTTAA CGGAACGGAT GGATGAACTG CCCAAGAACT TCTCGGGGGG CATGCAACAA
CGTGTCCAAA TCGCCAAAGC CTTAGCAACA AATCCACCGC TATTGTTTTT GGACGAAGTC
ACCACTGGAT TAGATTTATC AGTACAGGCC GCCATTCTAG ACTTGATTAT GGAAATTCAA
CATGAAAGCA ACACCGCCAT GATTGCAGTA ACACATGATT TAGGCGTGAT TCGCTTACTG
GCAGATCGCA CCATTATGAT GAAATATGGG CGCATCGTTG AAACCGGTTT AACCGATCAA
ATTTTAGAAG ATCCACAAGA TGCCTATACC CAACGCCTTG TCGCCTCTGC ACTTTAA
|
|---|
| Protein sequence | MSNDKILEVR NLSKVYGKGC SKCFESTGPK HDTNICPHCG SVVAAHDISF DLYRGEILGI
MGESGSGKST SIKNLFFDEM PTSGQATFFD QGKQYDLFKL NAQQKRHLRN HHFGMVYQNP
VLGLNFNVSA GGNIAERLLM NNITHYSDIR DRAIELLRRT EVLTERMDEL PKNFSGGMQQ
RVQIAKALAT NPPLLFLDEV TTGLDLSVQA AILDLIMEIQ HESNTAMIAV THDLGVIRLL
ADRTIMMKYG RIVETGLTDQ ILEDPQDAYT QRLVASAL
|
|---|
| |