Gene Tcr_2059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2059 
Symbol 
ID3761976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp2274233 
End bp2274841 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content45% 
IMG OID637786808 
Product(Acyl-carrier protein) phosphodiesterase 
Protein accessionYP_392323 
Protein GI78486398 
COG category[I] Lipid transport and metabolism 
COG ID[COG1182] Acyl carrier protein phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000039255 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACGG TATTACGAAT TGACAGCAGC GCGTTATCAA ACGGTTCTCA CTCGAAAGCA 
TTGGCGGATT TTTTTCAAAC CCAATGGTTA GAAAAACACC CGACTGATTC GTTTCAAACA 
CTTGATTTAA GTCAGACACC TCCGCCTCAC TTATCCGAAG CGACCATTGG CGCGATGTTT 
ACGCCTACGG AAGAACGTTC TAAAGAACAA ACGCAACAAC TTGCATTATC CACTGACTAT 
ATCGAACAAT TGAAAAAAGC TGATGTCATT CTAATCAGTA CCCCTATGTA TAATTTTGGC 
ATTCCTTCAA CGCTGAAAGC CTATTTAGAC CACAGCTTAC GCGTTGGCGA AACGTTTGTT 
TACACGGATA AGGGACCAAA AGGCTTATTA GAAGGCAAGA AAGCCATTGT TGTGGCGGCT 
TCAGGCGGCG ATTATACGCA GTCCCCGTTG GATGCGATGA ACTTTGTAAC GCCCTACTTA 
AAGACTGCAT TAGGGTTTAT CGGAATTGAA GACGTCACAC TTGTCGAAGC GCCGGGGATG 
GCGGGTGACG AAGCTTCCAT CAACAAATCG ATTAAGCAGG CAAAACAGAC TTTACAGAAT 
TGCCTCTAA
 
Protein sequence
MATVLRIDSS ALSNGSHSKA LADFFQTQWL EKHPTDSFQT LDLSQTPPPH LSEATIGAMF 
TPTEERSKEQ TQQLALSTDY IEQLKKADVI LISTPMYNFG IPSTLKAYLD HSLRVGETFV 
YTDKGPKGLL EGKKAIVVAA SGGDYTQSPL DAMNFVTPYL KTALGFIGIE DVTLVEAPGM 
AGDEASINKS IKQAKQTLQN CL