Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_2056 |
Symbol | |
ID | 3761973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 2270010 |
End bp | 2272424 |
Gene Length | 2415 bp |
Protein Length | 804 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637786805 |
Product | penicillin-binding protein 1A |
Protein accession | YP_392320 |
Protein GI | 78486395 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000993377 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACAG ACTCAAATTC GCAGACGCCT GAAAAAAACG ATACGCCGCC AACGAAAAAA CGCAGCCGAT TTAAACGTTT TTTCTGGTTT TCCACTTTCT TCGGATTTAT CATTGCTCCC GCTACGATCG TGCTGACTTA TGCGATTACC GTTTACCCAA CGCTCCCGGA TGCCTCTACA TTAAAAGATG TCACCTATCA AGTTCCCTTG AAAATCGTCA CAAAAGATCA TCAGTTGATT ACCGAAATCG GTACTAAAAA ACGCATCCCA TTAGACTATT CAGAAATCCC CGAAAGAATG ACGCAGGCAA TTATCTCTTC GGAAGATGAA AGCTTTTTTG AACACGGCGG TGTCGACTAT AAAGGCTTGG CCCGTGCCGT TTATGAATTG GTGACCACTG GCAGTAAAAA ATCAGGGGGA TCCACCATCA CCATGCAGGT GGCGCGTAAC TTCTTTTTGA CCAAGAAAAA AACTTATTTA CGTAAAGTGA ATGAAATTGT TCTGTCTTAT AAAATTGAGC ATCAAATCAG CAAACAGGAA ATTTTGTCGC TTTATCTCAA CAAAATCTTT TTAGGGTATC GCTCATACGG GGTCGCTGCG GCCGCTCAAA CGTACTATGG TAAATCGATC AATGAGCTCA CGTTGGATGA ATTTGCCATG ATTGCTGGGT TGCCCAAAGC CCCATCTCGC TACAACCCTA TCTACAACCC AGAGCGCGCC AAAATCCGTC GTAACTATGT TTTACGTCGT ATGTATGAAA ATCATTATAT TACTCAGGAA GAAATGACCC AGGCGCAGAA TGTTCCGGTT CATGCCAAGT TAACCGGGGC TCAAATTGAT ATTGAAGCCG GGTATGTCGC TGAAATGGCA CGAAGCTTTG CCATTGATAA CTTTGGTGAA GACGCTTTAA AAAATGGCTT AACGATTGTC ACCACCATTG ACAGCCACCT CCAATCTGTC GCCAATCAGG CGGTTAGAAG TGGACTGCAA GATTATGAAA GACGCCATGG TTACAGAGGC CCTATCAAAC ACCTAGCCCC CACACTGCTC ACCGATCAGG AACAACTGTT AGAAACATTG GACGACATTC CAAAATTTGG TTTCCTTGAA GTGGGCGTGG TCACCGATGT GACCGAAGCC AATGCCAATG TGTTGATGGC AAACAACGAA CAAATTACTT TGAATTTCGA AGACATGCGA TGGGCGGCAC CGTATATTGA TGAAAACAAA ACCGGTCCCG ATCCTGAAAG TGCTTTGGAT GTGCTCACGG CCGGCGATGT GATTTATTTA CAAAACAAAG ACGATCACTG GCAGCTCGCA CAAGACCCTC AAACCGAATC CGGCCTGGTG TCCATTGACC CTAAAGATGG CAAAATCATT GCTCTTGTGG GTGGGTTTGA TTACTTTAGA AGTAAATTCA ACCGCGTTCT TCAAGCACAA CGTCAGGTGG GGTCTAATAT CAAACCATTC TTGTATTCCA GTGCTTTGGA GACGGGGCTG ACGGCTGCCA GCATCATCAA CGATGCTCCT GTTGTGTTTC ATGACAGTGC CTTAGAAGAC ACTTGGCGCC CAGAAAATTA TTCTGGTCGT TTCTATGGCC CAACCCGTTT ACGTAAAGCC TTAGCGCATT CTCGAAATCT GGTATCGATT CGGTTATTAC GCCAAATCGG CATTCGTTAT GCGGTTAATT ACATGGAACG CTTCGGGTTT CCAAAAGATC AACTCAATGC GCACCGTGAC CTGTCACTCG CGCTGGGATC GGTCCCGCTG ACGCCTATTC AAGTGGTTCG AGGTTACGCC ACATTTGCCA ACACCGGTTA TCGCATCGAG CCTTACATCA TTGATTCGGT TTTGGATTTT AACGGCGACA CGCTGTATAA GGCACACCCT CTAAAAGCGT GTATGACACA ATGCTATGAA GGCGATCCCC AGAATGCGCC GCGCGTCATT ACGCCACAAA ATGCTTACAT CATGACCTCA ATGATGCAAG ACGTCATCAA CTATGGCTCT GGGCGTAAAG CCAAAGTGCT AGGACGACAA GATATTGCTG GAAAAACGGG CACGACCAAT GAACAAAAAG ACGCTTGGTT TTCTGGATTC AATCCAGAAA TTGCCACCAC CGTTTGGGTC GGATTTGATA CTCCCAAAAC ATTAGGACGC TCAGAAGTCG GTGGGCGTGC CGCACTGCCG ATTTGGATTG ACTATATGCG TGAAGCATTA AAGCCTTACC CTAATGCCCC CTTTCCGTTA CCAGAAGGGC TGGTTAATGT ACCCATTGAT CGTTCAACAG GCATGGCTGT CCCCGCCGAC ACCCCGGGCG CTTTCTTTGA AGTTTTCCGT GAGGCTTATG CGCCTAAGAT TCCGGACCTT TCCGAAAAAC GAATGGAAGA GATCACGCAA GAACTGTTCG AATAA
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Protein sequence | MTTDSNSQTP EKNDTPPTKK RSRFKRFFWF STFFGFIIAP ATIVLTYAIT VYPTLPDAST LKDVTYQVPL KIVTKDHQLI TEIGTKKRIP LDYSEIPERM TQAIISSEDE SFFEHGGVDY KGLARAVYEL VTTGSKKSGG STITMQVARN FFLTKKKTYL RKVNEIVLSY KIEHQISKQE ILSLYLNKIF LGYRSYGVAA AAQTYYGKSI NELTLDEFAM IAGLPKAPSR YNPIYNPERA KIRRNYVLRR MYENHYITQE EMTQAQNVPV HAKLTGAQID IEAGYVAEMA RSFAIDNFGE DALKNGLTIV TTIDSHLQSV ANQAVRSGLQ DYERRHGYRG PIKHLAPTLL TDQEQLLETL DDIPKFGFLE VGVVTDVTEA NANVLMANNE QITLNFEDMR WAAPYIDENK TGPDPESALD VLTAGDVIYL QNKDDHWQLA QDPQTESGLV SIDPKDGKII ALVGGFDYFR SKFNRVLQAQ RQVGSNIKPF LYSSALETGL TAASIINDAP VVFHDSALED TWRPENYSGR FYGPTRLRKA LAHSRNLVSI RLLRQIGIRY AVNYMERFGF PKDQLNAHRD LSLALGSVPL TPIQVVRGYA TFANTGYRIE PYIIDSVLDF NGDTLYKAHP LKACMTQCYE GDPQNAPRVI TPQNAYIMTS MMQDVINYGS GRKAKVLGRQ DIAGKTGTTN EQKDAWFSGF NPEIATTVWV GFDTPKTLGR SEVGGRAALP IWIDYMREAL KPYPNAPFPL PEGLVNVPID RSTGMAVPAD TPGAFFEVFR EAYAPKIPDL SEKRMEEITQ ELFE
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