Gene Tcr_2052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2052 
Symbol 
ID3761969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2266197 
End bp2267018 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content46% 
IMG OID637786801 
Productexonuclease III 
Protein accessionYP_392316 
Protein GI78486391 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000169666 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTG TCTCTTTTAA TGTTAACAGC GTGCGCATGC GATTACACCA ACTGCAAGCA 
CTTACCGATT CATACGCACC CGACATCATC GGGCTGCAGG AAACCAAAGT TCAAGACCAT
GAGTTCCCTT TAGCCGACAT CGAAGCGATG GGGTACCATG CGATTTATAT GGGGCAAAAA
ACCCATTATG GGGTTGCCAT TCTGTATAAA AAATCTTTGG TGCTGAAAGC CAGCCAATAT
GGTTGGTCGC ACGATGGTGA AGACGCACAG AAACGCATCA TCATGGCCGA CTTTGAAGAT
CAAAAAGGCA ATGACGTGCG GGTGATTAAT GGCTATTTTC CACAAGGTGA AAACCGCAGC
CACCCGATTA AATTCCCAGC CAAAGAAGCG TTTTATCAAG ACTTGATGAC CTACTTGAAA
GAAGAATGTT CGCCCGAACA AAATCTGGTG GTCATCGGTG ACTTTAATAT TTCACCGGAA
GATAAAGACA TTGGCATTGG TGAACCCAAC CGCAAACGCT GGTTAAGAGA TGGCAAAACC
AGTTTCTTAC CGGAAGAACG CGAGTGGTGG GCCACGTTGA TTGGCTGGGG GCTAAAAGAT
ACTTATCGTA AAGTTCACCC CGAAGAAGAT CGTATTTTCA GCTGGTTTGA TTATCGCTCT
AAAGGGTTCG ATGCGGAACC CAAACGTGGG CTCAGAATCG ACACCGTACT GGCGACCAAG
TGTTTGACTG AAAAAGCCGT AGACAGTGGC GTTGCGTATG ACATCCGAGG AATGGTAAAA
CCTTCTGATC ACGCGCCGGT CTGGACTGAA TTTAAATTTT AA
 
Protein sequence
MKIVSFNVNS VRMRLHQLQA LTDSYAPDII GLQETKVQDH EFPLADIEAM GYHAIYMGQK 
THYGVAILYK KSLVLKASQY GWSHDGEDAQ KRIIMADFED QKGNDVRVIN GYFPQGENRS
HPIKFPAKEA FYQDLMTYLK EECSPEQNLV VIGDFNISPE DKDIGIGEPN RKRWLRDGKT
SFLPEEREWW ATLIGWGLKD TYRKVHPEED RIFSWFDYRS KGFDAEPKRG LRIDTVLATK
CLTEKAVDSG VAYDIRGMVK PSDHAPVWTE FKF