| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_2038 |
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| Symbol | |
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| ID | 3761767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 2249884 |
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| End bp | 2252325 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637786787 |
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| Product | hydrogenase (NiFe) small subunit (hydA) |
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| Protein accession | YP_392302 |
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| Protein GI | 78486377 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase
[COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATTG TCATTATTGG CGGCGGGATC GCAGCGGATT ATTTAGCCAA CCAGATTTTG
GAAAAAGATT CAGCCACGGA AGTGCTAATC CTGTCCAAGG AATCGTACGC GCCTTATGAT
CGTATTCACC TATGTGATTT GGTTTCGGGA ACCTCTTGCA TTCAAGACAT TACACTTGAA
CTGAATCCTA ACGTCAAAGT GATGTTGAAT CAGGAAGTCA CGGCCATTAA CCGACAGGCC
AAGCAAGTCA TTACAGAACA AAGCCAATTC GAATACGACT ATCTCATCAT TGCCAGCGGC
TCTCAACCCA AAACCTTGTT TGATATTGAA CATATTGATA ACGCGGTCAC ATTCCGCAGC
GCGGATGACA GTTTTAAAAT CGCTAAAAAT TTGCAGGACC GCAATGTGGT GATTGTCGGT
GCCGGTCCAA TCGGCTTGGA ACTGTTGGAC ACACTGATGG ACATGCCCGC ACCGAAACGT
ATTTATCTGA TCGTACGGGA CGAATCCCTC TATTCCGGTG ATTTGGATCC TTCCAGTGTG
GCGTTGATGC AAAAAACCTT TGAAGAAGAT CCACGAATTG TTCTGTCGTT CAATGATGAA
ATTGTCGATA AAACGATTGA AAAAGGACAT ATGACGGCGC TGCAAACCAA GCAACACAAG
ATTGATGATC CGTTGTTGAT CTTCGGCATT GGTATTCGAC CAAACATCGA CTTTGCCAGA
TCGTCCTTGG AATGTGATCG GGGCGTTTTG GTGGATCGCA CAATGCGCAC CTCGGATTTG
TTTATTTACG CCGTTGGTGA AGCAGCACAA ATTGATGAAA GTGGTTTCAG TGCCGGGCAT
GCCAAAGAAT GTCGACTGGA AGCGGATGTG GCCGTCAGTA ATATTTTCAA AACCGAGGTT
GCAGAGTTCC GTCGTGAAGT GGCGATAGAT GGCTTGAAAG TCGGCGCGTT TGAATTTATT
GACGTGGTGT CTCCTCATTA CAATATGCAC GATGAAGACA ATGAAGTGGT GTTGTTGCGT
TCTAAAAAAG AAGGACGCAT CGACCAATAC ATTCTCAATA ATGAGAAGCT GATGCGCTTT
ATTGGCGTCA ATTCCAATGT GGATGCGTTG TATCTCAAGC AGCTTATCAT TGAAAATGAA
AATGTCGATG CCTCTTATTT GTATAACAAT CGTCATGAAA ATGAGCGCGG ACGTTTGGTG
TGCAGTTGCA CCGGCAGTTA TCAGAAAGAC TTGATTGATA TCATTGAAAC CCAAGCGGTG
ACCAGTTTTG CCGAACTGAA GCCTTATTCG GAAGCTGGGC GTGTGTGTGG GCGCTGTAAG
AAAGATGTCG CCAACCTGAT CGCACATGCC CATGTCGATA AAGATGAGGT CGAACGCAAA
AGAGCCGAGC GAGAGGAAGC GGCCAAGGCC GCGCAAATCG AGAAAGTGGA AAAACGACTG
GAAAAGTTCA ATCGCTTGCA TCCGTCGAAC CAGATTGACA TGGCGGACTT TGAAGCGGCT
TTACAGTCAT TTGATAAAGC GCAGGACTTT AATGGTTGGG TGTCGATGAT GACGCTGAAT
TTACAGTTGC CGCCAGAGTA TGACAATTTG GTCTGCCGGA GTATTCAGCA TTTAAATAAA
GTTCCCGTCA TCTGGCTTGA GCTGGCGGAT TGCACCGGTA ATTCCGAAGC GTTTATTAAA
ACGGTCAATC CGACGATTGA TGAATTGATT TTGAAATTCA TTTCACTTGA TTACCATGAA
TTGTTAATGG CCGCTTCAGG CCCGCATTCT GAAACTCGGT TGGATCAATT GATTGAAGAA
GATCAGGGTG ACTATATTTT GATTGTAGAA GGCGCGGTGC CGTTAGGCAT GGGCGGAAAC
TTTCTGCGAA TCGGCCCGCA AGGCGAAACG GGAGAAGCGT TGTTAAAACG TGTTGCGCAA
CATGCTTCCG CGGTCATGGC GGTCGGTTCC TGCGCCTTTG ATGGGGGCGT AGTCGCGGCG
GCTCCAAACC CTACTGGCGC AGTTGGGGTG TCCGAAGCTT TAGGCCGTGA TGACATTATC
AATTTACCGG GTTGCCCGGT GAACCCTATT AATGTGGTCG GCACCTTATT GCATTACATT
ATGTTTGCAG AAATGCCCGA GTTGGGCGAC AACAACAAAC CGGTTTGGGC GTATGCGCCG
CGCGTGCATG ACAATTGTGA ACGCCGCGGT CATTACGATG CTGGAGAATT TGTCAAAGAG
TGGGGCGATG AAGGTGCCAA AAAAGGCTGG TGTCTTTTTG AAATGGGTTG CAAAGGGCCT
TATGCCGATA TGAATTGTGC TCAAATGAAG TTTAATGAAG GAACGTCCTG GCCGGTGCAA
GTCGGTCATG GCTGTATCGC CTGTGGTAAA GGTAAAGTCG CCTTCGATGA ATTTGCCAAT
AACCGTAAAG TAATCAATGT GCCAAAAGAG TTGACGTCAT GA
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| Protein sequence | MRIVIIGGGI AADYLANQIL EKDSATEVLI LSKESYAPYD RIHLCDLVSG TSCIQDITLE
LNPNVKVMLN QEVTAINRQA KQVITEQSQF EYDYLIIASG SQPKTLFDIE HIDNAVTFRS
ADDSFKIAKN LQDRNVVIVG AGPIGLELLD TLMDMPAPKR IYLIVRDESL YSGDLDPSSV
ALMQKTFEED PRIVLSFNDE IVDKTIEKGH MTALQTKQHK IDDPLLIFGI GIRPNIDFAR
SSLECDRGVL VDRTMRTSDL FIYAVGEAAQ IDESGFSAGH AKECRLEADV AVSNIFKTEV
AEFRREVAID GLKVGAFEFI DVVSPHYNMH DEDNEVVLLR SKKEGRIDQY ILNNEKLMRF
IGVNSNVDAL YLKQLIIENE NVDASYLYNN RHENERGRLV CSCTGSYQKD LIDIIETQAV
TSFAELKPYS EAGRVCGRCK KDVANLIAHA HVDKDEVERK RAEREEAAKA AQIEKVEKRL
EKFNRLHPSN QIDMADFEAA LQSFDKAQDF NGWVSMMTLN LQLPPEYDNL VCRSIQHLNK
VPVIWLELAD CTGNSEAFIK TVNPTIDELI LKFISLDYHE LLMAASGPHS ETRLDQLIEE
DQGDYILIVE GAVPLGMGGN FLRIGPQGET GEALLKRVAQ HASAVMAVGS CAFDGGVVAA
APNPTGAVGV SEALGRDDII NLPGCPVNPI NVVGTLLHYI MFAEMPELGD NNKPVWAYAP
RVHDNCERRG HYDAGEFVKE WGDEGAKKGW CLFEMGCKGP YADMNCAQMK FNEGTSWPVQ
VGHGCIACGK GKVAFDEFAN NRKVINVPKE LTS
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