Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_2037 |
Symbol | |
ID | 3761766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 2248181 |
End bp | 2249887 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637786786 |
Product | nickel-dependent hydrogenase, large subunit |
Protein accession | YP_392301 |
Protein GI | 78486376 |
COG category | [C] Energy production and conversion |
COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGAAT CCACTAAAAA ACAGAAAATC GTAATCGATC CAGTCACCCG AATTGAAGGC CATTTAAGGG TTGAAATTGA AGTGGATGAA CACAATACCG TGACCGAAGC CTGGGCGTCT GGTCAATTGT TTCGTGGGAT TGAAACCATT CTGAAAGGTC GGGACCCACG GGATACCGGT TTGATTGCTC AACGTATTTG CGGCGTTTGT ACCAATTCGC ATTATCGTGC GTCAATCAGT GCTGTGGAAA ATGCTTATGA TATCGTTCCC CCGCGCAATG CTGAAATCGT CCGAAATCTG GTTTCCTTGG CGTTGTTTGT GCAGGATCAT CTGGTGCATT ATTACCATTT GCATTCGTTG GATTACGTCG ATGTTACCAG CGCATTGGAA GCCGATTGTC ACAAAGCCAG TGAAATAGCC CATCAATGGC ATAAACATCC GTATAACTGT TCGCAAGGCG ATTTAGCGGC CGTGCAGGAA AAGCTGGCAA ATTTTGTCAA CGCAGGGCGT CTAGGGCTTT TCGCCAATGG ATACTGGGGC CATGCCCAGT ACAAATTGTC GCCGGAAGAA AATCTGATTC ATATGAACCA TTATCTGGAA GCGTTGCGGA TTCAACGAGA AGTGAGCAAG GCGATTGCCA TTTTCGGGGG GAAAACGCCG CACCCGCAAA ATCTGGTGGT CGGGGGCGTT ACCAGTGTGA TGGACATGCT GAATCCGCAA CGCTTGAATG ACTATCTTTT CATTATCAAA GATACGCAGG AATTTTTGAA ACGCGCGTAT CTGCCGGATA TGAAAATGGT GGTGGCCGCC TATGGCGACA ATATCAAAGC CGGAGAAGGC CGCGGCCACG GCAACTTTAT GTGTTCGGGC GGCTATCAAT TGTCAGATGA CGAACCGTTG TTTGCCAGCG GCATTATTTG GGGGCATGAC TTCTCGAAAA TAGACGCGTT TGATGACACT CAAATCACGG AAGAGGCCTC TCGTTCCTGG TATGCCGATG AAGCGCCGAC CCGTCCGTAT GATGAAACCA CAGAACCGGA CTACACCGAT ATGAATGCGG ACGGCACCTT GAAAACCGAA GGCAAATACA GCTGGATCAA AGCCCCGCGT TATCAAGGTC AACCAATGGA GGTGGGGCCA GCCGCCCGTA TGATCATTGG TTATGTGAAA AAGGCCAAGA CGGTGCGCCC TTATATGCAA CATTTTATGG ATGATACCGG CTTGGAACTG ATCGATTTTT CGTCTGCCAT TGGCCGCAAT GCGGCACGCG CCGTTGAAGC CGAAGTGGTG TGCGATCTGA TTTTTGCATT TGTCAGTGAG CTGATTGAAA ACATTAAATA TTACGATGAA ACCACCTGGA CAAAATACGA TTTTGAGGCC TTGCCGCTTG AAACCAAAGG GCGAGCTGTG TTGGAAGTGC CACGGGGCAT GTTAAGCCAT TTCATCCGTA TTGAGGAGGC CAAGGTCAAG AATTATCAGG CAGTGGTGCC CACGACTTGG AATGCCTCTC CTAAAGACGG TCAGGGCGTT CGTGGGCCTT ATGAAGAAGC GATTGTTGGC CTTAAATTGG CCGACCCGCA ACAACCTTTG GAAGTGCTTC GTGCCGTGCA TTCTTTTGAT CCATGTCTGG CCTGTGCCGT GCATGTGATT GATGCGCAAG GCCAAACCTT ATCGGAACAT CGCGTGAATC CAATCGGAAC ATTTTGA
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Protein sequence | MTESTKKQKI VIDPVTRIEG HLRVEIEVDE HNTVTEAWAS GQLFRGIETI LKGRDPRDTG LIAQRICGVC TNSHYRASIS AVENAYDIVP PRNAEIVRNL VSLALFVQDH LVHYYHLHSL DYVDVTSALE ADCHKASEIA HQWHKHPYNC SQGDLAAVQE KLANFVNAGR LGLFANGYWG HAQYKLSPEE NLIHMNHYLE ALRIQREVSK AIAIFGGKTP HPQNLVVGGV TSVMDMLNPQ RLNDYLFIIK DTQEFLKRAY LPDMKMVVAA YGDNIKAGEG RGHGNFMCSG GYQLSDDEPL FASGIIWGHD FSKIDAFDDT QITEEASRSW YADEAPTRPY DETTEPDYTD MNADGTLKTE GKYSWIKAPR YQGQPMEVGP AARMIIGYVK KAKTVRPYMQ HFMDDTGLEL IDFSSAIGRN AARAVEAEVV CDLIFAFVSE LIENIKYYDE TTWTKYDFEA LPLETKGRAV LEVPRGMLSH FIRIEEAKVK NYQAVVPTTW NASPKDGQGV RGPYEEAIVG LKLADPQQPL EVLRAVHSFD PCLACAVHVI DAQGQTLSEH RVNPIGTF
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