Gene Tcr_2033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2033 
Symbol 
ID3761762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2244011 
End bp2244790 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content47% 
IMG OID637786782 
Producthypothetical protein 
Protein accessionYP_392297 
Protein GI78486372 
COG category[S] Function unknown 
COG ID[COG3228] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.370372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTTTA AATGGCTTAG TCACCTGCAC ACACGCTACA TTCTGCATCG TCATCCGATT 
CCGCATGAAC TCTGGCATCG TTTGATGCGG GACAATGCTT TATTTCATGA CCTGACATCG
GTTGAAAGAG CGCATTTGCG TGAATTGACG ACCTTATTCC TCCACCAAAA GTATTTTAAA
GGCACGCAAG GGTTTGAGGT GACGCTCGAC ATCGGGGTGG CGGTTTCTGC TCAGGCTTGT
TTGTTGATTT TGAATTTGGG GTTGGATTAT TACGATAAGT GTGTCGATAT TATCGTTTAT
CCCAGTGCGT TTAAAGTGGC AAGACAAACT CCAGATGAAA TGGGGTTGGT CTCACATAAG
GATAAAGTGT TGGCGGGTGA GTCCTGGTTG CAAGGGCCGG TCATTATCTC TTGGGATGCT
TCACAGGCGG AAATGGGAAA GGCACTGCCT GGTCATAATG TAGTGTTGCA TGAGTTTGCC
CATCAGTTGG ATATGTTGAA TGGTCGTGCT AACGGCATGC CGCCTTTGCA CCGTAATATG
GTACGGGAAG TTTGGACAAA GGCGTTCACC GAAGCGTTTG AGCACCTTCA AAGTCGGTTA
GAGCATCAAC AACACCCGGA AATTAATGAA TATGCTGCCA CCTCTCCAGC AGAATTTTTT
GCGGTGACCA CGGAGTACTT TTTCACCGCG CCGACAAAGC TGCGCCGTCA TTTTCCCAAA
GTATTTACTC AGCTGTGCTT GTTTTACCGA CAAAACCCAA TCAAACGAAA ATCAGGTTGA
 
Protein sequence
MAFKWLSHLH TRYILHRHPI PHELWHRLMR DNALFHDLTS VERAHLRELT TLFLHQKYFK 
GTQGFEVTLD IGVAVSAQAC LLILNLGLDY YDKCVDIIVY PSAFKVARQT PDEMGLVSHK
DKVLAGESWL QGPVIISWDA SQAEMGKALP GHNVVLHEFA HQLDMLNGRA NGMPPLHRNM
VREVWTKAFT EAFEHLQSRL EHQQHPEINE YAATSPAEFF AVTTEYFFTA PTKLRRHFPK
VFTQLCLFYR QNPIKRKSG