Gene Tcr_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2017 
Symbol 
ID3761217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2223028 
End bp2224671 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content53% 
IMG OID637786766 
Productphosphoglucomutase 
Protein accessionYP_392281 
Protein GI78486356 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0033] Phosphoglucomutase 
TIGRFAM ID[TIGR01132] phosphoglucomutase, alpha-D-glucose phosphate-specific 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0565501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTTT CGCCTTATGC TGGAAAACCC GCTCCACTCT CTCTATTAGA AAATATTCCC 
AAACTGATGA CCGACTATTA CAACCTGATT CCCGATGCCA GCAACCCAGA TCAAGCCGTT
GCTTTCGGCA CCTCCGGTCA CCGTGGTTGT GCCAGCAACA CCGCCTTTAA CGAAAACCAC
ATCGCCGCGA TTGCGCAAGC CATTGTCGAA TATCGTGACG AACAAGGCAT CAGCGGCCCC
ATTTTCATCG GCATGGATAC TCATGCGTTA TCCGAAGCCG CGCACGCCAC CGCCATTGAA
GTGTTTGCCG GCAACAGCCT GAATGTCATC ATCCAAGGCA ACGGACGCTA CACTCCCACA
CCTGTCGTTT CGCACGCCAT TTTGACCTAC AACCAAAACC GCACGCAGGC TTTGGCGGAT
GGCGTTATCA TCACCCCATC GCACAACCCT CCGCAAGATG GCGGGTTTAA ATACAACCCA
ACCAATGGTG GCCCAGCGGA TACCGATGCC ACAACCGTGA TTCAAGACCG CGCCAATGAC
ATTCTGATGA ACGACATGAG CGCCATCAAC CGCATGCCGT TAGCCGATGC CCTAGCTTCG
GAATTTGTCT CCGCCGAAGA CTTAATCATG CCGTATGTCA AAGATCTGGA AAACGTCGTC
GATATGAAGG CGATTAAAGA CGCCGGACTG AAACTTGCCA TTGACCCGAT GGGCGGCGCC
GCGATTGATT ATTGGCAACC CATTGCCGAC CATTATGGTT TGAATCTGGA AATCGTCAAC
CAGCACGTTG ACCCGACTTT CTCGTTCATG AGTGTCGATA AAGACGGCAA AATCCGTATG
GACTGTTCCT CGCCTTACGC CATGGCGGGA CTGATTGCCT TAAAAGACAA CTACGACATC
GCTTTCGGTA ACGACCCCGA TGTCGATCGC CACGGCATCG TCACCAAATC AGTCGGTTTG
ATGAACCCGA ACCATTATCT GGCGGTGGCC ATTCACTACC TTTGCACCCA CCGTCCACAA
TGGTCAGACT CGGTTAAAAT CGGGAAAACG TTGGTGTCCA GTTCCATGAT TGACCGCGTA
GTAACGTCCT TAGGCAAAAA CCTGTCGGAA GTGCCGGTTG GTTTCAAATG GTTTGTGGAC
GGGCTTGTTT CAGGCGATTT TGCCTTTGGT GGCGAAGAAT CCGCCGGCGC CTCTTTCTTA
CGTATGGACG GCACCACTTG GAGCACCGAT AAAGACGGCA TTATCATGAA CTTGCTTGCC
GCCGAAATCA CCGCGGTAAC CGGAAAAGAC CCTGGGCAGC TGTATCAAGA ATTGACCGAA
CAATTCGGCC ACCCGGTTTA TAGCCGCATT GATGCGCCGG CCAACCGTGA GCAAAAAGCC
ATTCTGAAAA ACCTGTCTCC GGACATGGTG AAAGCCGATA CCTTGGCGGG CGAACCGATT
TTGGACAAAC TGACCCATGC ACCGGGCAAC GGCGCAGCGA TTGGCGGCCT GAAAATCACC
ACCGAAAACG GCTGGTTCGC CGCCCGCCCG TCCGGCACGG AAGACATTTA TAAAATCTAT
GCTGAAAGCT TTAAAGGCCA ATCGCATTTG GATGAGATTC TGAAAGAAGC GCAAGCGATT
GTGACGGATG CGTTGAATGG CTAG
 
Protein sequence
MSLSPYAGKP APLSLLENIP KLMTDYYNLI PDASNPDQAV AFGTSGHRGC ASNTAFNENH 
IAAIAQAIVE YRDEQGISGP IFIGMDTHAL SEAAHATAIE VFAGNSLNVI IQGNGRYTPT
PVVSHAILTY NQNRTQALAD GVIITPSHNP PQDGGFKYNP TNGGPADTDA TTVIQDRAND
ILMNDMSAIN RMPLADALAS EFVSAEDLIM PYVKDLENVV DMKAIKDAGL KLAIDPMGGA
AIDYWQPIAD HYGLNLEIVN QHVDPTFSFM SVDKDGKIRM DCSSPYAMAG LIALKDNYDI
AFGNDPDVDR HGIVTKSVGL MNPNHYLAVA IHYLCTHRPQ WSDSVKIGKT LVSSSMIDRV
VTSLGKNLSE VPVGFKWFVD GLVSGDFAFG GEESAGASFL RMDGTTWSTD KDGIIMNLLA
AEITAVTGKD PGQLYQELTE QFGHPVYSRI DAPANREQKA ILKNLSPDMV KADTLAGEPI
LDKLTHAPGN GAAIGGLKIT TENGWFAARP SGTEDIYKIY AESFKGQSHL DEILKEAQAI
VTDALNG