| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_2009 |
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| Symbol | |
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| ID | 3761209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 2214216 |
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| End bp | 2215940 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637786758 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_392273 |
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| Protein GI | 78486348 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAG AGATCAAATT TTCAGATCTA GGGCTTTCTG CGCCCATTTT AAAAACACTT
GAAGAAATCG GTTACGAAAC TCCCTCCCCA ATTCAGGAAC AGGCGATTCC TGTTTTATTG
AAAGGCGGAG ACATCTTAGG GATGGCTCAA ACAGGGACAG GTAAAACAGC CGCGTTTGCC
TTACCGATTC TGTCCAAGAT CGACCTTAAA CAAAAAGACC CACAGGTTTT AGTCCTTGCG
CCAACTCGCG AACTCGCTAT TCAGGTAGCC GAGGCATTCC AAACGTTTTC TCGCGGCGTA
AAAGGCCTTC ATGTCCTTCC TATTTACGGT GGTTCAGAAT ATGGCACACA AATCCGTGCC
TTAAAGCGTG GTGTACATGT CGTGGTTGGA ACACCTGGCC GTGTTATGGA TCACATTAAA
AAAGGCACTT TAAAGCTTGA TACATTAAAA GTGATGATTT TGGACGAAGC CGATGAAATG
CTTCGTATGG GCTTTATCGA TGATGTTGAG TGGATTCTGA AACACACTCC CGATACGCGT
CAAATTGCAC TTTTCTCAGC CACCATGCCG AAAGAAGTAC ACCGTATCGC CAACACATAT
TTACAAGACC CGACCGAAGT CATCATTAAA CAAAAAGCGG CAACCGCCTC TTTGATTGAA
CAGAAATACT GGCTCGTCAG CGGACTGCAT AAACTGGATG CGCTAACCCG TATCCTAGAA
GCGGAAACCT TTGACGGCAT CATCATCTTT GTTCGTACCA AAACAGCCAC TGTCGAGTTG
GCCGAAAAAC TGGAAGCACG TGGCTATGCC GCTGCCGCCC TGAATGGGGA TGTGGCACAG
AACCAACGTG AGCGTACCGT TGACCAACTG AAAAAAGGCA AACTGGACAT CCTGATTGCA
ACCGATGTTG TGGCCCGTGG GTTAGATGTT GAGCGTATCA GTCACGTTAT TAACTATGAC
ATTCCTTATG ATAACGAATC GTATGTTCAC CGTATCGGCC GTACAGGACG TGCTGGGCGA
AGCGGTACTG CGATCTTATT TGTGGCCCCA AGAGAGCGTC GTTTATTGCG TTCGATTGAA
GCGTCGACAA AGAAAAAAAT CACGCAGATG GAATTGCCAA CGGCACAGGA AATCAACGAC
AGTCGTATCA CACGTTTTAA AGACAAAATC GTTGATGCGG CTCAAGGCAC CGATCTTGAT
TTTTATCAAA AAATGGTCGA GTCCATCGAA TCGGACAATA ACATCCCAGC CATTGAAATT
GCCGCTGGCC TCGCTAAATT ATTGCAGGGT GACGTGCCGT TTTTCTTAGA TGAAAAACCG
GTTAAACATA AAGAATTTAA AGAGCGTGAT GGCGGTCGTG AAAGAAATCC ACGACGTGCC
AAAGGTGAAA GAAGTGAACG AGGTGATCGT GGCAACCGCA GTCGTCGTCA AACACCGCCT
AATGAAGGAA TGGCTCGCTT TAGAGTGGAA GTCGGCCGTC AACACGGTGT TAAACCTGGG
AACATCATTG GCTGCATTGC CAATGAAGCC GGTTTAGATG GCGAGTTCAT CCAAAAACTG
ACCATTGAAG ACAATTACAG CATGGTGGAT TTACCATCAG ACATGCCTAA AAACGTTTTC
AATGAATTGA AAGGGGCTTG GGTCTGTGGT CAGCAACTTA AAATCAATCC AGTTAAAGAC
GTTTCTCAAA GCGCAAAACG TCGTTTGAAA CCTCGCAAAA AATAA
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| Protein sequence | MNTEIKFSDL GLSAPILKTL EEIGYETPSP IQEQAIPVLL KGGDILGMAQ TGTGKTAAFA
LPILSKIDLK QKDPQVLVLA PTRELAIQVA EAFQTFSRGV KGLHVLPIYG GSEYGTQIRA
LKRGVHVVVG TPGRVMDHIK KGTLKLDTLK VMILDEADEM LRMGFIDDVE WILKHTPDTR
QIALFSATMP KEVHRIANTY LQDPTEVIIK QKAATASLIE QKYWLVSGLH KLDALTRILE
AETFDGIIIF VRTKTATVEL AEKLEARGYA AAALNGDVAQ NQRERTVDQL KKGKLDILIA
TDVVARGLDV ERISHVINYD IPYDNESYVH RIGRTGRAGR SGTAILFVAP RERRLLRSIE
ASTKKKITQM ELPTAQEIND SRITRFKDKI VDAAQGTDLD FYQKMVESIE SDNNIPAIEI
AAGLAKLLQG DVPFFLDEKP VKHKEFKERD GGRERNPRRA KGERSERGDR GNRSRRQTPP
NEGMARFRVE VGRQHGVKPG NIIGCIANEA GLDGEFIQKL TIEDNYSMVD LPSDMPKNVF
NELKGAWVCG QQLKINPVKD VSQSAKRRLK PRKK
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