| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_2004 |
|---|
| Symbol | |
|---|
| ID | 3761204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 2207050 |
|---|
| End bp | 2208825 |
|---|
| Gene Length | 1776 bp |
|---|
| Protein Length | 591 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637786753 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
|---|
| Protein accession | YP_392268 |
|---|
| Protein GI | 78486343 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000000169064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCACC AAAAAATAAA ACAAACGTTA AAAGCTTGTG AACAAGAAAA CAGTGCCTTG
CAGGGGGTTG TTCAAGCCAT TAACCGTTCT ATGGCAATGA TTGTGTTTAC GCCGCAGGGT
GAAATCTTGG ATGCGAATGA AAATTTTTTG AATGCGGTCG GGTTTTCTTT ACAAGACCTG
AAAGGTCAAC ACCACCGATT ACTGGTGCCG GAAGAGATTA AGCAATCGTC GGAATATCAG
CAGTTTTGGC AGAAATTGGC GCAGGGTGAA TATTTTCAAG ACCGTTTTTT ACGTCAAGAC
GCCCAAGGCA ATACCATTTG GTTGGAAGCC AATTACAATC CTGTTTTCGA TGAAAATGGA
CGCGTGATCC AAGTCATCAA GTTTGCTACC GATATTACCG AGCAGGTTGA GCAGGAAGCC
AAAATTGCGG CTAAACTGGA AGCGATTGAC AATTCAATGG CGGTGATTGA ATTTGATTTA
GACGGCCATA TTCTTGAAGC AAATGAAAAC TTTTGTAAAA CGATGGGGTA CGATTTGTCT
GAAATCAAAG GGCAGCACCA TCGACTCTTT GTTGAACCCA GTTATGCGCA AAGTCCTGCT
TATGCATCTT TCTGGCAGGC CTTGAAAAAT GGGGAAGCGC AAATTGGAAC CTTTGAACGT
TTTGATAAAA ATCACAACCC TATCTGGCTG GAAGCCAATT ACAACCCAGT TTATAACCAG
GAAGGCGAAT TGACGGGCTT TGTGAAGTTT GCAACGGATG TCTCTACTAA CAAAAGTACC
TTGCTTTTAA CCACAGTGGT GGCGGATGCG GTTTCTGTGT TGGATGAATT CAGCCAAGGA
AACATTACGG CCAGAATGAA AAATCATTTA GACGATGCCA ACAAAACCAT GTTCGATGAC
AGCATTGGTC GACTCAGTCA TGGGTTTGAA ATTGTGGCAG ATCGGTTGGG TGAGGTGGTG
GCCACCGCAT TGAATGCGTC GGAAACGGTG AGCTCAGCAG CCCATGAAGT TTCTGAAGGT
TCGGCGGCAC TGAATCAGCA AGTTCAGGAG CAAGCCGCTG CGCTGGAAGA AACCTCTGCA
ACAATGGAAG AAATGAATTC GGCGGTGCAG AATAATACCG ATAATGCTCA GGAAACAGCC
AAAGTCGCTT CGGACGTTCA GCTGAAAGCG GAAGAGGGGG CCAACGTTAT GCAGCAAACC
ATTGACGCCA TGAATGCGAT TCAGGCGTCC AGTCATAAAA TTGCAGACAT TGTCACACTG
ATTGATGGCA TCGCTTTCCA AACCAATTTG CTGGCGTTGA ATGCCGCGGT TGAAGCGGCG
CGAGCGGGAG ATCACGGGCG TGGGTTTGCA GTTGTGGCCG GTGAAGTACG CGCTTTGGCC
CAAAAGTCCG CTGAAGCGGC CCGAGACATT AAAAAGTTAA TTGACGAAAG TGTGGAACGG
ATTGATATTG GCACTGGCTT GGCTTCCAAC TCGGGAGACA TGTTGCAAGG CATCCACCAA
TCGGTGGATC GAGTGGCCGA AATGATTGAA CAAATTGCCA CGGCCTCGGT TCAGCAAGCG
CAGGGCATTA ACCAGGTTCG TCAATCCATT GCACAAATTG AATCGGTGAC TCAGCAAAAT
GCGGCGCTTG TTGAAGAGAC TAATGCATCG TCTGAAAGCC TCAGTTATCA AGCTCAAGTG
CTGCAAAAAG ACATGTCCTT TTTCACGGTG TCACCTCAAT TAGCGGCACC CGATAGTATG
ATGAGTGATA TGAACAGAAT GAAACGAATT GCGTAG
|
|---|
| Protein sequence | MFHQKIKQTL KACEQENSAL QGVVQAINRS MAMIVFTPQG EILDANENFL NAVGFSLQDL
KGQHHRLLVP EEIKQSSEYQ QFWQKLAQGE YFQDRFLRQD AQGNTIWLEA NYNPVFDENG
RVIQVIKFAT DITEQVEQEA KIAAKLEAID NSMAVIEFDL DGHILEANEN FCKTMGYDLS
EIKGQHHRLF VEPSYAQSPA YASFWQALKN GEAQIGTFER FDKNHNPIWL EANYNPVYNQ
EGELTGFVKF ATDVSTNKST LLLTTVVADA VSVLDEFSQG NITARMKNHL DDANKTMFDD
SIGRLSHGFE IVADRLGEVV ATALNASETV SSAAHEVSEG SAALNQQVQE QAAALEETSA
TMEEMNSAVQ NNTDNAQETA KVASDVQLKA EEGANVMQQT IDAMNAIQAS SHKIADIVTL
IDGIAFQTNL LALNAAVEAA RAGDHGRGFA VVAGEVRALA QKSAEAARDI KKLIDESVER
IDIGTGLASN SGDMLQGIHQ SVDRVAEMIE QIATASVQQA QGINQVRQSI AQIESVTQQN
AALVEETNAS SESLSYQAQV LQKDMSFFTV SPQLAAPDSM MSDMNRMKRI A
|
|---|
| |