Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1992 |
Symbol | |
ID | 3762304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 2190239 |
End bp | 2190880 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637786741 |
Product | pyridoxamine 5'-phosphate oxidase |
Protein accession | YP_392256 |
Protein GI | 78486331 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTTGA ATTTAGCCGA TTTAAGACAA CGTTATTTAA AAGATGGGTT GGATGAAAAT AATACCGATG ACAACCCGTT CGTGCAGTTT GAAAAGTGGT TCCACCAGGC ACAGAAGTCA GAGCTGTTAG AGCCGAATGC GATGGTGTTG TCTACCGTGA ATGAGGTCAA TCAACCCTCA ACAAGAACGG TTTTGCTTAA GCAGTTCAGC GATGACGGAT TCGTCTTCTT TACCAATTAT CGGAGCCAGA AGGCAAAAGA CATTCAGCAT AATCCTAAGG TGGCCTTGCA CTTTAATTGG CTGGAACTGG AACGTCAGGT CAAGATTCAG GGGGTTGCAG CAAAAATCTC GTTAAAAGAC TCCATGCGGT ATTTTGCCAC GCGCCCGAAA GGCAGCCAAA TTGGTGCTTG GGTCAGTCAT CAAAGTGAGG TTATCTCATC GAAACAATTA TTGTTGTCAC AGTTTGAAAA GATGAAACAA AAATTTCAGT CCGGAGAGAT TCCTTTCCCG GATTTCTGGG GAGGCTATAT GGTGGTTCCC CAGCAAATTG AATTTTGGCA AGGAGGAGAT AACCGTTTGC ATGATCGTAT TTGTTATACC TTGAAAGACA ACCAGTGGGT CAAACAGCGT CTGGCACCTT AA
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Protein sequence | MTLNLADLRQ RYLKDGLDEN NTDDNPFVQF EKWFHQAQKS ELLEPNAMVL STVNEVNQPS TRTVLLKQFS DDGFVFFTNY RSQKAKDIQH NPKVALHFNW LELERQVKIQ GVAAKISLKD SMRYFATRPK GSQIGAWVSH QSEVISSKQL LLSQFEKMKQ KFQSGEIPFP DFWGGYMVVP QQIEFWQGGD NRLHDRICYT LKDNQWVKQR LAP
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