Gene Tcr_1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1981 
Symbol 
ID3761181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2176019 
End bp2176948 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content48% 
IMG OID637786730 
Productbiotin biosynthesis protein BioC 
Protein accessionYP_392245 
Protein GI78486320 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID[TIGR02072] biotin biosynthesis protein BioC 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAT TCAGCCGAGC CCATATTCAA AAACATTTCA ACCATGCCGC CGTCAGTTAT 
GATGAAGCCG CCGTCCTGCA AAAACAAGTC GCGACCCATG TCGATGAGCG TTTAGACTTG
GTCCTCGTCA AACCCAAAAC CATTTTGGAT GTCGGTGCCG GCACCGGAAT TTTAACCAGC
AAACTGGTTC AGCGCTATCC AGGCGCCAAA ATACTGGGTC TTGACTTGTC TCACAACATG
CTCGAAAAAG CTCAGCAAAA TTTAGCGCGC CCAGGCTGGA AAGGCTTACC GTCATTTTTA
TCAAACGCTC TAGGCTTAAC GAAGCAAGGT GCTCAACTCA TCAATGCGGA TGCCAATCAC
ATTCCGTTAG CCGATGCCTC AGTCGACTTG ATTGTCACCA ACTTGATGCT GCAATGGTGT
GATGATTTGG ATAAGGTGTT TCAAGAGTTT CGTCGCGTGT TAAAACCAGA AGGCTTATTA
ATGCTGACCA CTTTTGGACC GGATACCTTA AAAGAACTAC GCCAGGCCTG GTCAAAAGTG
GACGAACAGG AACATGTCAA TACCTTTATT GACATGCATG ACATCGGAGA TGCCTTGATT
CGGAATGGCT TTGGTCAACC CGTGATGGAT GTAGAGCACT TTACGCTCAC TTATGAAAAG
CCCATCGGCG TTTTAAAAGA TTTAAAAGCA ATTGGCGCCA CTAACGCCAC TGAAACCCGC
CAACATGGCC TAATGGGCAA ACAACGCTTT ACGCAAATGC TGGAAGCCTA TGACCAGCAA
CGCCAAAATG GGCTGATCCC AGCGACGTAC GAAGTGATTC ACGGTCATGC CTGGGCCGCC
CCCGAAGTGG TTAAAGGGCC AGGTCGTAAT CGTGAAGGCG TGGTGGAAAT CAGTCTGGAT
GAATTCGCCA AGCAAACCCA ATCTCTTTAA
 
Protein sequence
MQKFSRAHIQ KHFNHAAVSY DEAAVLQKQV ATHVDERLDL VLVKPKTILD VGAGTGILTS 
KLVQRYPGAK ILGLDLSHNM LEKAQQNLAR PGWKGLPSFL SNALGLTKQG AQLINADANH
IPLADASVDL IVTNLMLQWC DDLDKVFQEF RRVLKPEGLL MLTTFGPDTL KELRQAWSKV
DEQEHVNTFI DMHDIGDALI RNGFGQPVMD VEHFTLTYEK PIGVLKDLKA IGATNATETR
QHGLMGKQRF TQMLEAYDQQ RQNGLIPATY EVIHGHAWAA PEVVKGPGRN REGVVEISLD
EFAKQTQSL