Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1964 |
Symbol | |
ID | 3761164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 2161494 |
End bp | 2162324 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637786713 |
Product | cbb3-type cytochrome c oxidase subunit II |
Protein accession | YP_392228 |
Protein GI | 78486303 |
COG category | [C] Energy production and conversion |
COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.658843 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGATA ATCAAGAACC TAAAAATTTA CAGGAACGTC TGGAGAGAAA TATCTTCGGA TTGTTCATGG CAACTGCATT AGCCGTTTCA ATTGCGGGTA TTGTAGAAAT CGTCCCATTG TTTTATCTAA AAGAAACAGT GGACTATACA GAAAAAACCG ATAAATACGG TAACGTAAAG AACGAGAAAT TCCCTGAGTT GGTTTGGGAG CGTACCTTTA CACAAGATGC TGATGGAAAA TTGGTATCGG ATAAAGCACT TTATAAACAA GATCGCAACG GTAACTGGGT GATTGCAGAT TGGAAAGCCG GTGACGGTGT TCGTCCATAT ACGCCACTTG AGTTAGCGGG TAGAGATATC TATTTGCGTG AAGGGTGTTA TATTTGTCAC TCTCAAATGA TTCGTCCATT CCGTGATGAG CGTGAGCGTT ATGGTCACTT CTCTTTGGCG ACAGAGTCTA TGTATGATCA TCCTATGCAA TGGGGCTCAA AACGTACAGG GCCTGATTTA GCGCGTTTGG GTGGTAAGTA TTCCGATGAA TGGCATGTTA TGCATTTATT ACGTCCTCAG GATATGGTTC CGGAGTCAGT GATGCCTGCT TATCCTTGGC TGGCAGAAAA TCCGATTACA GAAGATTTCT TTGGAACAAA GCGTGATATG ACAAAGCGTC TTTCTGTAAT GCGTACGTTA GGTGTGCCAT ATACGGATGA AGAAATTGAA AATGCCAATA AAGCGATTGA AGGCTACACC GAGATGGATG CGATGGTTGC ATACCTTCAA GTGTTAGGCA CCATGGTTAA ACTAGACGAT AGTAAGTCTT ACCGTGAGTA A
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Protein sequence | MSDNQEPKNL QERLERNIFG LFMATALAVS IAGIVEIVPL FYLKETVDYT EKTDKYGNVK NEKFPELVWE RTFTQDADGK LVSDKALYKQ DRNGNWVIAD WKAGDGVRPY TPLELAGRDI YLREGCYICH SQMIRPFRDE RERYGHFSLA TESMYDHPMQ WGSKRTGPDL ARLGGKYSDE WHVMHLLRPQ DMVPESVMPA YPWLAENPIT EDFFGTKRDM TKRLSVMRTL GVPYTDEEIE NANKAIEGYT EMDAMVAYLQ VLGTMVKLDD SKSYRE
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