| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1941 |
|---|
| Symbol | |
|---|
| ID | 3761135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 2128178 |
|---|
| End bp | 2129539 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637786684 |
|---|
| Product | peptidase M16-like |
|---|
| Protein accession | YP_392205 |
|---|
| Protein GI | 78486280 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGATGC GGATCGGTTT ATTAGGACTG ATTTTAATTT TTTCTTATCC GGTTCAGGCA
ACTGTTTCAA AGTTTCAGCT TGATAATGGG ATGAAAATTC TGGTGAAGGA AGATCATCGT
GCCCCTGTGG CGGTTCAACA GGTTTGGTAT AAAGTTGGAT CCAACTATGA GTATGGCGGC
ATTTCAGGTA TTTCTCACAT GCTCGAGCAT ATGATGTTTA AGGGAACGCA AAAACTTGCC
CCTGGGGAAT TTTCTAAAAT AGTGTCGAAA TTGGGTGGGC AGGATAATGC CTTTACCTCG
TCTGATTACA CCGCTTATTA TCAGGTGGTT GGCAAACAGC ATTTGGAAAA AATGATGGAG
CTGGAAGCCG ATCGGATGCG AAATGTGGTG ATTACCGATG CAGACTTTCA AAAAGAAAGA
GATGTGGTGA CCGAAGAACG CCGATGGCGC ACAGAAGATC AACCCGAATC AAAACTGTAT
GAGCTGTTTA AAGCGACTGC TTTTGTGAAC AGCCCGCAGC ATCATCCGGT CATCGGTTGG
ATGACCGATA TTCGGCATTG GACGAAGGAA GATGTCCGAC GTTGGTATCA AAAATGGTAT
GCGCCGAACA ATGCAACGTT AGTAGTGGTT GGTGATGTGA ATCCACAGCA GGTTTATCAG
TGGGCTCAGA AATATTATGG GGTTCATCAA GCAGAGCAGA TTACCCCTCC TAAACCGCGT
ACTGAAATCG AGCAGGTCGG CGAGCGTCGT ATCCAACTGA AAGGTCCGAC AAAATCTCCC
AGCCTGATGA TGGGGTTCCA TGTACCGTCC TTAGTTACCG CTGAAAATCC AGCCGAGGTG
TATGCGTTAT CTGTGTTAGG CAGCGTGCTG GATGGTGACG ACAGTGCTCG GTTGACCAAG
AACTTGGTGC GCGGCTCAAA AATTGTGGCT GGAGCGTCGA CCAGTTACGA CGAAACCAGT
CGTTTGCAGA CGCTGTTTCG TTTTGATGCA ACCCCTTCAG CAGGCAAAAC TCTGCAAGAG
ATCGAAGCCG CACTGTGGGC GGAAATTGAT AAACTTAAAT CGACTCCTGT CTCTCAAAAA
GAGTTAGAGC GTGTGTTGGC TCATGCGGAA GCACAGTATG TTTTTCATCA AGATTCGATT
CAGACGCAAG CCATGATTTT AGGCTCTCTG GTCAGTGTCG GACTGCCAAC GGATACTTAC
GAAAATTGGA TTGAAAACCT TAGAAAGGTC ACACCGGAAC AAGTGCAGAA AGTGGCGCAA
AAATATTTAA AACGAGATGC CGTGACGGTT GCAACGTTGC TGCCGAATGG TGAAGAAGCC
AAACCCAGTT CTGGTCAAAT GATGCACGGA GGGATTCGAT AA
|
|---|
| Protein sequence | MMMRIGLLGL ILIFSYPVQA TVSKFQLDNG MKILVKEDHR APVAVQQVWY KVGSNYEYGG
ISGISHMLEH MMFKGTQKLA PGEFSKIVSK LGGQDNAFTS SDYTAYYQVV GKQHLEKMME
LEADRMRNVV ITDADFQKER DVVTEERRWR TEDQPESKLY ELFKATAFVN SPQHHPVIGW
MTDIRHWTKE DVRRWYQKWY APNNATLVVV GDVNPQQVYQ WAQKYYGVHQ AEQITPPKPR
TEIEQVGERR IQLKGPTKSP SLMMGFHVPS LVTAENPAEV YALSVLGSVL DGDDSARLTK
NLVRGSKIVA GASTSYDETS RLQTLFRFDA TPSAGKTLQE IEAALWAEID KLKSTPVSQK
ELERVLAHAE AQYVFHQDSI QTQAMILGSL VSVGLPTDTY ENWIENLRKV TPEQVQKVAQ
KYLKRDAVTV ATLLPNGEEA KPSSGQMMHG GIR
|
|---|
| |