Gene Tcr_1917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1917 
Symbol 
ID3761111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2099791 
End bp2100504 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content47% 
IMG OID637786660 
ProductDNA repair protein RadC 
Protein accessionYP_392181 
Protein GI78486256 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGGGT TATCTTACCA AAAAATTTGT AAAAACATGG CAATAACCGA CTGGCACGAA 
AATGACCGCC CCAGAGAAAA ACTGCTGAAG TTTGGCGCCC CTCATTTGTC AGATGCCGAG
TTATTAGCCA TCTTTTTACG GGTTGGGGTG AAAGGCAAAA GTGCCGTGGA ACTGGCGCAG
GATTTACTCG ATCACTTTGG CAGTTTAGAA CGCTTATTAA ACGCCGATGA AGCGGCGTTC
TGTGAAGCAA AAGGGCTCGG GCAAGCAAAA TATGTTCAGC TGAAAGCCGT ACTGGAAATG
TCACGGCGTC ATTTTGAATC CGGATTGAAA AAAGGGGAAG CCTTAACTCA GCCTGAAAAG
GTCGCTCGTT TACTTCAGCA TCACATAGGC CATCAGTCGC GGGAAATATT TGGCCTGGTG
TTACTCGACC AGCAAAACCA ATTCATTCAA TTTGTGCCAT TATTTACCGG CACCATCAAT
CAAGCCACCG TTCACATTCG TGAAGTTTTG AAGACAGTAC TTGATCACCA TGCTGCGGCC
GTGATTTTGG CACACAACCA CCCTTCTGGC GACCCAACGC CTAGTCAGTC CGACAGAGAC
CTTACTCATC AGATCCAACA GGGATTACAG TTAATTGAAA CGCGCTGCCT GGATCACATT
ATTCTCGGCG ATCACGGTCG CTGGTACTCT TTTACACAGC AAGGAATATT ATAA
 
Protein sequence
MMGLSYQKIC KNMAITDWHE NDRPREKLLK FGAPHLSDAE LLAIFLRVGV KGKSAVELAQ 
DLLDHFGSLE RLLNADEAAF CEAKGLGQAK YVQLKAVLEM SRRHFESGLK KGEALTQPEK
VARLLQHHIG HQSREIFGLV LLDQQNQFIQ FVPLFTGTIN QATVHIREVL KTVLDHHAAA
VILAHNHPSG DPTPSQSDRD LTHQIQQGLQ LIETRCLDHI ILGDHGRWYS FTQQGIL