Gene Tcr_1915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1915 
Symbol 
ID3761109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2098176 
End bp2099384 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content49% 
IMG OID637786658 
Productphosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 
Protein accessionYP_392179 
Protein GI78486254 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTT TACTTGGCGT TACAGGCGGT ATTGCTGCCT ATAAATCATT GGAGTTGGTG 
CGTCTGTTTG TAAAGGCCGG GCATCAAGTG CAAGTGGTGA TGACGGCAGG CGCGAAAGAG
TTTATTCAAC CGTTGTCTTT TCAGGCCTTA TCAGGGAATC CGGTTCGAGA TCAGTTGTTT
GACGAGAATC AAGAAGCGGG GATGGGGCAT ATTGAATTGG CGCGCTGGGC TGATTTGATT
GTGATTGCTC CTTGCTCGGC TGAAACGTTG GCAAAACTGA GAATGGGCCG AGCCGATGAT
TTGTTGATGA CGTTGTGTCT TGCAACCGAT CGTCCGATGC TGCTGGCCCC TGCGATGAAT
CGTTTAATGT GGGCCAATGA GGCCACGCAA GAAAATGTGG CGTGCCTTCA GCAGCGAGGG
ATGAAGGTTC TGACGCCTGC GGAAGGTGAA CAAGCCTGCG GTGAAGTGGG GGCCGGGCGC
ATGCCTGAGC CGGAAACGAT TTTTGCGCAA GCAGAATACT ATGTGGCCGA GCAACAGAAA
AATGCCCAGG CCTGGGCAGA ATTACAATCC GTTTGGCAAG GTAAACGCCT TTTGATTACC
GCCGGCCCAA CGTTTGAAGA CATTGACCCT GTACGGTTTA TCGGCAATCG TAGTTCCGGC
AAAATGGGGT TCGCCATTGC AGAGGTGGCT CGCAAATTGG GTGCGCAAGT AACCTTGATT
GCCGGTCCGG TCGCTTTGAA CCACTCGCCT GACATTACAA GAATCGATGT GCGTTCTGCA
CAACAGATGT TTGAGGCGGT ACAGTCTTGT TATGCACAAC AGGATGTTTT TATCAGTGCG
GCGGCCGTCG CCGATTTTCG ACCGGCCAAT CACTCAAATC AAAAAATAAA GAAAAACGCT
GACCAAGAAG GTATGTCGTT ACCGTTGGTG AAAAATCCAG ATATTGTGGC GTGGGTTGCA
CAACAAGAAG ACAAGCCTTT CGTGGTCGGG TTTGCGGCAG AAACCGAGAA TGTGCTAGAT
TATGCACAGT CCAAGTTAAA ACGTAAACAA TTGGATATGA TCTGTGCCAA TCAAGTTGGA
AAAGGCTTGG GATTTGAATC GGATCAGAAC GCTTTAACAT TGGTGACACA TGATGCCGTT
GAAGCTTTGA AGGCGTCGAG TAAAAAACAA CAGGCATTTG AGCTGTTGAA GTTCATCGCA
GCGCTTTAA
 
Protein sequence
MKVLLGVTGG IAAYKSLELV RLFVKAGHQV QVVMTAGAKE FIQPLSFQAL SGNPVRDQLF 
DENQEAGMGH IELARWADLI VIAPCSAETL AKLRMGRADD LLMTLCLATD RPMLLAPAMN
RLMWANEATQ ENVACLQQRG MKVLTPAEGE QACGEVGAGR MPEPETIFAQ AEYYVAEQQK
NAQAWAELQS VWQGKRLLIT AGPTFEDIDP VRFIGNRSSG KMGFAIAEVA RKLGAQVTLI
AGPVALNHSP DITRIDVRSA QQMFEAVQSC YAQQDVFISA AAVADFRPAN HSNQKIKKNA
DQEGMSLPLV KNPDIVAWVA QQEDKPFVVG FAAETENVLD YAQSKLKRKQ LDMICANQVG
KGLGFESDQN ALTLVTHDAV EALKASSKKQ QAFELLKFIA AL