| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1913 |
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| Symbol | |
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| ID | 3761107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 2094199 |
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| End bp | 2097555 |
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| Gene Length | 3357 bp |
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| Protein Length | 1118 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637786656 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_392177 |
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| Protein GI | 78486252 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCTG AAACCATAAT GCCAAATCTA AAAAATGACT TTAATAGTAA GTTATTTCAC
CATTTAGACA ACCTGTTGTC TGAGATTCGT CGTTTAGATG TTAAGACAAC ATTTGGCTCG
GATCTTGAAC CGTTTTATTA CGTGCTCGAA TCCTTGTCCT ATGTGTCCAG GTCTTATGGT
TCTTCTTCCT TTTCAAAAAT CCTCAAGCAA TTAGAACGTT TAATTTGGCG CCCCAAAGCG
TTGCTGTCGC TCGATGAAAA AGAAGACTTT ATGGCTTCGC TAGAAGGGCT GAAAGAAACG
GTGTTTGAAC CCAAAAACAT TCAATCGAAT GACGTTCTTT CTCCCCGTAT TTGTTTCTAT
GGACTCGAGC ACGAAGAGAT TGAAACCGTT TTGCAAAACA CCTCTGAATT GTTTTTGCGT
TATCGCGTGA TCACTTCATT AGAGGGACTT AAACGTTTAA GAAGCGATGA CATCTTAGTG
TTTCGATTAA CCGAATCGGA ACAACAAACG GTCGAATGCA TTCATTCTTT AACGTCGCTG
GTTTTTTCAG TAGATCAAGC GATTTATCTG TTGCCGGAAG AAAATCTCTC CAGTCGGTTA
AAACTGGCAT CTTATGGGGT TGAGAATCTT TTTATTTGGC CCGATGAAGC CTTTTACTTC
CGCCGTTATT TCTATCATCT GTATCATCGA GCATTGCCGG TCTGCCAACC GTTTAAGATG
CTTTTTGTCG GGACGTCAAA GCGAAGTGAA GAACTCTGTA CTCGTTTGCA AGAGTTTGGA
GTGGATGTAT GTCAAGTCTG TGACAGTTTG ACGGTTTTGA AACGCTTGCA GCAAGATACC
CCCGATTTGG TGATGATGGA CGCTGAAGAG GACTGTTTTG ATGTGCCGGC GTTAAGTACC
GCAATTCGAC AGCTCCCCAA TGCAAAACGT TTGATGGTGC TCAATTACCA AGCCATTCCA
GAGCGTTTAA GACGGTTTAA TCGCTTAGCG CATTTTGAAG CGGATATTGC TGTTTCAAAA
TTACAAACGG TGGATGAAGC CTGTGCTGAA GTATTGGCAC GTTTGGCGCA TCAGCGAGAT
GTCGTTTTTT TATCATCCGA AACAGATAAT GCACTCCAAA AAACAGCCGA TTTTAAAACG
GGGTTGGACT TCCACAACAT TGTGTCGGTG ACGGATAAGC AGGGACGTAT CATTGAGGTA
AATGATATGT TTTGTCGAAT CAGTGGGTAT CCACGTGATG AGTTGCTTGG ACAAGATCAT
CGAAAAGTTA ATTCAGGAAT TCACTCAAAA ACGTTTTTCA AAGAAATGTG GCAAACCATT
TCGTCTGGCC ATGCTTGGAC AGGTGAAATC TGTAATCGTG CCAAAAACGG CGATCTCTAT
TGGGTGGAAT CAAGCATTGT TCCGATTTTA GATGAACATG GACAGCCTCA AAAATACATT
TCCATTCGAA CCGATGTGAC GCATTTAAAA CAAACCGAGC AAAGATTGAT TGAAGCGCAG
TCGCTTGCCA AAATGGGGTA TTGGGAGGCT GATTTAATCA ACGGAGCGCT GGACTGGTCG
GATTACATTT ATGATATTTT TGGGTTTGAT AAAGCCCATT TTTCACCCAG TGTGGAAGCC
TTTAAAAAAG CCATTCACCC AGACGATGTT GAGTTGGTTG AAGCCAGTGA GCGTGAAGCG
AGTATTTCCG GGGTGCATGA TGTGGTGCAT CGAATTATTC GTCCGGATGG GCAGATTCGA
TATGTGCATG AACTCGGGCA AGGGCATCGT AAAAATGGTG AATTGATTAG ATTATCGGGA
ACGGTTCAAG ATATTACCGA TTTAAAAGAG GCCGAAGCCG CTCTTAAAAA GAGTGAACAA
AGGCTGAACC TAAGTCAACG TTTTGCCAAT ATTGGAACCT GGGATTGGAA TATTAAAACC
AATGAACTTT TTTGGTCAGA GCGAATCAGT CCGTTGTTTG GAGGAGAGCA AGCCGAGCTG
GAAATCAGTT ATGACAGTTT CTTGAATGCG GTTCATCCGG ATGATCGTCA GAAGGTTGTT
GAGGCGGTGA CAGCTTGTAT TGAACAAGGT ACGGAATACG ATATAGAGCA TCGAGTGGTT
TGGAAGGATG GAAGCGTTCG ATGGATGCAT GAGAAGGGCG ATACGGTAAT AGGTCAAGAT
GGAAGTCCAA CGAATATGTT GGGAGTGGTT CAAGACATTA CCCGTCGTAA AGAGGCCGAA
GAGCATTTGA TTCAAGCTTT AGAAAGAGCC GAAAAAGCGG ACAAAGCTAA GTCAGAGTTT
TTATCAAGCA TGAGCCATGA GCTTCGAACG CCGTTAAATT CGATTATCGG CTTTTCCGAT
TTATTGAGTA TGGCCGACTT GCCGGAAAAA GAACAGCATC AAGTTGATCA TATTTCTGAA
AGTGGCCACC ATTTATTGGC GTTGATTAAT CAATTGCTAG AGCTGTCGAA AATTGAACAG
GGTGAAGTGG AACTTAAGAT GACAGATGTC GTTTTGGAAG ATACGGTTCA TTATTGCCTG
TCAACGGTGG ATCCTATGGC GCAAAAATAT TTGGTGGAGT TGGAAAGGCC GGACTGGAAA
AGTTTTGATT ATCATGTGTA TGCAGATGAG CTTAAGTTGA AGCAGGTGAT GTTAAACTTT
TTATCGAATG CGATTAAATA TAATCGACCA GATGGCAAAG TGATGTTGGC CGCAACGTTA
TTGGAAACGG GTAAAGTTCG TATATCCGTT ACGGATACGG GGTATGGTAT TCCAAAAGAT
AAACAGTCTA ATGTGTTTAA TTCATACGAT CGACTGGGTC ATGAATCTTC TACGATTGAA
GGCACGGGCA TTGGTTTGAA CATTACACAA CAGTTGGTGT TTTTGATGGG CGGAGACATA
GGCTTTTCCA GTCAGGAAAA TGAAGGCTCT TGCTTTTGGG TCGACTTTCC CTTATCCACG
ATTCATCAGA CCGGTTTGCA GACGAAGGAT GATGGAGAAC CCAACACGGT GCAGAATGCT
TTGGTGAAAG TACTGCTGAT TGATAACCAG CCTCAAAATA TGCATGTCAT GGCTGGGTTG
GGCAAGGCGG GTGAGTTTAT GATGCTTAAT GTGGCACCTG ATTTAACGTT GGGAATGGAG
AAGGTTGAAA CATTCAAGCC AGACGTGATT TTTATAGGGA TGACATTAAC GAAAGAAGAA
GTACAAGAGG CTGTTCTGAA CCTCAAACAA TTGTCCATTT TTAAAGTAAA CAGTCCTTAT
GTTGTGTCTA TTAATTACTC TGAAGTGGAT GGAATTGATG AAGTGGTTTC CTCCCCTTTG
GATGAAGTAG AAATACAAAC GCTGATTCAT AAGGTACAGG AGTCAAAAGC ATCATGA
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| Protein sequence | MKPETIMPNL KNDFNSKLFH HLDNLLSEIR RLDVKTTFGS DLEPFYYVLE SLSYVSRSYG
SSSFSKILKQ LERLIWRPKA LLSLDEKEDF MASLEGLKET VFEPKNIQSN DVLSPRICFY
GLEHEEIETV LQNTSELFLR YRVITSLEGL KRLRSDDILV FRLTESEQQT VECIHSLTSL
VFSVDQAIYL LPEENLSSRL KLASYGVENL FIWPDEAFYF RRYFYHLYHR ALPVCQPFKM
LFVGTSKRSE ELCTRLQEFG VDVCQVCDSL TVLKRLQQDT PDLVMMDAEE DCFDVPALST
AIRQLPNAKR LMVLNYQAIP ERLRRFNRLA HFEADIAVSK LQTVDEACAE VLARLAHQRD
VVFLSSETDN ALQKTADFKT GLDFHNIVSV TDKQGRIIEV NDMFCRISGY PRDELLGQDH
RKVNSGIHSK TFFKEMWQTI SSGHAWTGEI CNRAKNGDLY WVESSIVPIL DEHGQPQKYI
SIRTDVTHLK QTEQRLIEAQ SLAKMGYWEA DLINGALDWS DYIYDIFGFD KAHFSPSVEA
FKKAIHPDDV ELVEASEREA SISGVHDVVH RIIRPDGQIR YVHELGQGHR KNGELIRLSG
TVQDITDLKE AEAALKKSEQ RLNLSQRFAN IGTWDWNIKT NELFWSERIS PLFGGEQAEL
EISYDSFLNA VHPDDRQKVV EAVTACIEQG TEYDIEHRVV WKDGSVRWMH EKGDTVIGQD
GSPTNMLGVV QDITRRKEAE EHLIQALERA EKADKAKSEF LSSMSHELRT PLNSIIGFSD
LLSMADLPEK EQHQVDHISE SGHHLLALIN QLLELSKIEQ GEVELKMTDV VLEDTVHYCL
STVDPMAQKY LVELERPDWK SFDYHVYADE LKLKQVMLNF LSNAIKYNRP DGKVMLAATL
LETGKVRISV TDTGYGIPKD KQSNVFNSYD RLGHESSTIE GTGIGLNITQ QLVFLMGGDI
GFSSQENEGS CFWVDFPLST IHQTGLQTKD DGEPNTVQNA LVKVLLIDNQ PQNMHVMAGL
GKAGEFMMLN VAPDLTLGME KVETFKPDVI FIGMTLTKEE VQEAVLNLKQ LSIFKVNSPY
VVSINYSEVD GIDEVVSSPL DEVEIQTLIH KVQESKAS
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